Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g3170 ATGGATGAAGAGAGCAGGGACATGGTGATAGAGGAGACGATGGGGATGGGGATTCATAATCAAATAAGGATGAGATCATCATCATCATCATCATCAGGAGGATCAAGAGAACCTCTGCTTGCCCTGAAGAAGAACAAGATGAACACCACTTCCCAGCTCGCCATTGTCGGAGCCAAAATCTGTCCCATTGAAAGTCTTGATTACGAGATGATTGAGAATGATCTTTTCAAGCAGGATTGGAGGTCTAAAACAAAGGAAGAGATCGTCCAGTATCTTGTCCTCAAATGGGCCCTTGCCCTTCTTATTGGTTTAGGCACCGGCCTCATTGCCTGCTTCAATAACATTGGCGTTGAGAATATTGCTGGTTTCAAGCTTCTACTCACCAATAATCTCATGCTCACTCACAAGTACCATCAAGCCTTTGCAGTGTATGTGTGCAGTAACATGATTCTCGCCATTGCTGCAGCAGCCCTCTGTGCTTACATTGCCCCTGCAGCAGCTGGCTCCGGCATACCTGAGGTCAAGGCATATCTCAATGGTGTTGATGCTCCTTCCATACTGGCTCCAACTACGCTCTTTGTAAAGATATTTGGTTCAATGTTTGGGGTTGCGGCGGGTTTTGTTGTGGGTAAGGAAGGACCTATGGTACACACGGGTTCGTGCATAGCGAATTTACTTGGACAAGGTGGATCTAAAAAATACGGGCTAACATGGAAGTGGCTGAGACATTTCAAGAACGATAGAGATAGAAGGGATTTGGTGACGTGTGGTGCAGCTGCGGGCGTTGCTGGTGCCTTCCGCGCCCCTGTTGGAGGAGTCCTTTTTGCACTTGAAGAAGCAGCTTCATGGTGGAGGAATGCTCTTCTCTGGCGGACATTCTTTACCACGGCTGTTGTTGCTGTTGTGCTGAGAGGTTTCATCCAGTTCTGCCGCCATGACGACGGCAGATGTGGCCTTTTTGGGGAAGGTGGTCTCATCATGTTTGATGTTAACTCTGCAATGCCCTCTTACACCGCACCCGACCTCCTCGTTGTTGTCTTCCTTGGCGTGATCGGAGGCCTTTTGGGGAGCCTTTACAACTATCTAGTCAGCCAGATCCTCAACATTTACGCCATCATCAATGAAAAAAGCCCTGCATTCAAGATTGTGCTTGTGATGGTAATCTCCATTTTGACATCGCTGTGCTCATTTGGGCTTCCATGGCTATCCAAATGCATCCCTTGCCCTGCTCACTTGGTGGACGAGTGCCCAACCATAGGGCGCTCCGGGAACTACAAGAACTTCCAGTGCCCACCCAACCACTACAACGACCTTGCCTCCCTCTTCTTCAACACCAACGATGATGCCATCCGCAACCTGCTCATCGCAGGCACCCAAAAGAGGTTCCAGCTATCCAGCCTCCTGATATTCTTCGTGGCCATATACTTGCTGGGGATACTGACTTACGGCATTGCCATCCCATCTGGCCTCTTCATTCCTGTCATACTTGCGGGGGCTTCCTATGGGCGCCTGGTGGGGAGCCTGCTTAGCCCATTCACGGTTTTAGATGTGGGGCTCTATGCCCTGCTCGGAGCGGCGTCCTTCCTTGGGGGCACCATGAGGATGACAGTCTCCATCTGCGTGATACTTCTAGAGCTCACAAACAACCTTCTCATGTTGCCGTTGGTCATGATGGTTCTACTCATCTCCAAGTCGGTGGCTGACTGTGTGAACAAGGGGGTTTATGACCAGATCCTCCACATCAAGGGCCTCCCATACATGGAAGCGCATGCAGGGCAATACATGAGGCACTTGGCTGCCAGCGATGTCGTCTCTGGGCCCCTATACACATTTTCTGGGGTTGAGAGGGTGGCGAATGTGGTGCATACTCTGAGGGCCACCCGCCACCATGGGTTCCCGGTGATTGACGAGCCTCCTTTCACGGAAGCCCCGGAGCTCTGCGGGCTTGTGCTCAGGTCTCACCTGCTCGTGCTGCTCAAGCACAAGGCTTTTGCAAGGCAGAGCGGGGTGACGTCATCCATATTAGGATCCCCGTCCTTGAGGGCGCATGATTTTGCAAAGCCTGGGTCGTCCGGGAAGGGGATCAAGTTGGAGGATATATGGATCTCCGAGGAAGAGATGGACATGTACGTAGACCTGCATCCAATCACCAACAGGTCGCCATACACAGTCGTAGAAACTATGTCTCTCACCAAAGCTGCTGTTCTTTTTCGAGAGCTCGCCCTCAGGCACTTGTTGGTCATCCCTAAAACACCTGGAGTGAGTAGCCTATCCCTATAA 2280 0.5118 MDEESRDMVIEETMGMGIHNQIRMRSSSSSSSGGSREPLLALKKNKMNTTSQLAIVGAKICPIESLDYEMIENDLFKQDWRSKTKEEIVQYLVLKWALALLIGLGTGLIACFNNIGVENIAGFKLLLTNNLMLTHKYHQAFAVYVCSNMILAIAAAALCAYIAPAAAGSGIPEVKAYLNGVDAPSILAPTTLFVKIFGSMFGVAAGFVVGKEGPMVHTGSCIANLLGQGGSKKYGLTWKWLRHFKNDRDRRDLVTCGAAAGVAGAFRAPVGGVLFALEEAASWWRNALLWRTFFTTAVVAVVLRGFIQFCRHDDGRCGLFGEGGLIMFDVNSAMPSYTAPDLLVVVFLGVIGGLLGSLYNYLVSQILNIYAIINEKSPAFKIVLVMVISILTSLCSFGLPWLSKCIPCPAHLVDECPTIGRSGNYKNFQCPPNHYNDLASLFFNTNDDAIRNLLIAGTQKRFQLSSLLIFFVAIYLLGILTYGIAIPSGLFIPVILAGASYGRLVGSLLSPFTVLDVGLYALLGAASFLGGTMRMTVSICVILLELTNNLLMLPLVMMVLLISKSVADCVNKGVYDQILHIKGLPYMEAHAGQYMRHLAASDVVSGPLYTFSGVERVANVVHTLRATRHHGFPVIDEPPFTEAPELCGLVLRSHLLVLLKHKAFARQSGVTSSILGSPSLRAHDFAKPGSSGKGIKLEDIWISEEEMDMYVDLHPITNRSPYTVVETMSLTKAAVLFRELALRHLLVIPKTPGVSSLSL* 760
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g3170 759 SUPERFAMILY Clc chloride channel 73 589 IPR014743 -
Aev01g3170 759 PANTHER CHLORIDE CHANNEL PROTEIN CLC-C 30 754 - -
Aev01g3170 759 PRINTS Plant CLC chloride channel signature 69 77 IPR002251 GO:0005247|GO:0006821|GO:0016020
Aev01g3170 759 PRINTS Plant CLC chloride channel signature 294 304 IPR002251 GO:0005247|GO:0006821|GO:0016020
Aev01g3170 759 PRINTS Plant CLC chloride channel signature 438 454 IPR002251 GO:0005247|GO:0006821|GO:0016020
Aev01g3170 759 PRINTS Plant CLC chloride channel signature 280 288 IPR002251 GO:0005247|GO:0006821|GO:0016020
Aev01g3170 759 SUPERFAMILY CBS-domain pair 593 749 IPR046342 -
Aev01g3170 759 Pfam Voltage gated chloride channel 152 568 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Aev01g3170 759 Gene3D Clc chloride channel 87 588 - -
Aev01g3170 759 PANTHER CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER 30 754 - -
Aev01g3170 759 CDD ClC_6_like 64 587 - -
Aev01g3170 759 PRINTS Chloride channel signature 518 534 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Aev01g3170 759 PRINTS Chloride channel signature 574 588 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Aev01g3170 759 PRINTS Chloride channel signature 195 214 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Aev01g3170 759 PRINTS Chloride channel signature 259 278 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Aev01g3170 759 PRINTS Chloride channel signature 164 181 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Aev01g3170 759 PRINTS Chloride channel signature 536 555 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Aev01g3170 759 PRINTS Chloride channel signature 486 506 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Aev01g3170 759 CDD CBS_pair_voltage-gated_CLC_euk_bac 600 750 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g3170 Aev-Chr1 32649024 32651687 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g3170 2 753 Ion Channels AT5G49890 72.053 0.0 1045
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g3170 K05016 - jre:108988922 1074.31