Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g3158 ATGTCGGAAATGCGGGTTTCTGATCCAAGCAAGCTGCACCTGAAGAAGGAGCTCACCCAAATCCGCAAAGCTGCGCGCGTCTTGAGGGATCCTGGCACCACTTCTTCTTGGAAGAAGTCACCCCTTAGCTCCTCAAGATCTGTGCCTCCTCCTCCTCCTTCTGCATGCACCGCCAACAACAATGGCAGCACCAGGTTCACTCACACCTCTCAGCTCGATTCTCGCTCGTCTTCTGTTGCCGCTAACAGCGGGAAAGAGAAGAGGGTCTTCTTGTACAACTGGAAGAGCCACAAATCGTCGAGCGAGAAGAGTGGAGTTGCCAAATACAACAACGAAGAAGAAGAAGAAGAAGAAGATGAAGAGGAAGAAGACGGTGATGGCAGGAATGAGGGATCTTCGTCGTCGCTTCTGGGGAGCTTCGAGGACAGCTTGAGTGATGCTCGGAATGGCTGCGATTCAAAGAGCGATACATACATGGGCGGTGGAGCTCGCTCTTCTTCCATCTTCAGACGTGGAGACGCCAGCCTTGCCTCCCTGGCCACCCCTGCTGCCAGAAGAGCAGTTCCCCCTAAGAAGAAGAGTAAGAAATCCAACGCTCTCTCACTCTCACTCTCCCATTTGGATCTTTTGGCTAAGTATCAGCATAGGGACAGGGATAGGGATGGGGATGGGGATATCAGCCTCAATCTTGGTGGAAAACCACTCTTCAAGTCCAATGCATTGCTTGACTCTGACGATACTGAAGACTACTCTAATTCCGAGGATGTGAGACGGGGTTCGGGGACATCCCCTTTGCTTCTCAAACTCAAGCACAAGAACTGGTCTCGATCTTCCTCCAAGTTGTTGCGCAGAAGCCGGAAGGAGGACTCTTCTTATTCTTATAGTACCCCTGCTCTGTCAACCAGTTCTTACAATAGGTATGCTCACCGTTATCCTAGCACTGTTGGCTCTTGGGATGGCACCACAACCTCCATGAATGATGGTGATGACGAGATAGATGATCATTTGGATTTGCCTGGCCGCCAGGGATGCGGAATCCCTTGCTACTGGTCCAAGAGGACACCCAAGCATAGAGGCATGTGTGGGAGTTGCTATTCACCTTCCCTATCAGACACTTTAAGGAGGAAAGGAAGTAGCATACTTTGTGGGGGACAAACTATTTATCCGAGACACCGGAGATCATCTGCGGCCTCCCACAAGCGGAGAATTTCCTTGAGGAGTGCTCAGGGTGTTATTCCATTGCTCACTAACAGTGGCGATGCTAGAGGAGGGTCTTCTATAGGAACTGGTAGGAGTGATGACGAGCTCTCTACAAACTTTGGGGAGCTTGATCTGGAGGGCTTGAGTCGATTGGATGGAAGGCGGTGGTCGTCGAGTTGTAGGAGTCAAGAAGGATTGGAGATTGTAGCTCTCAATGGGGACGGGGAGGAGGAAGGCACGCCTGAAAATAGCAGGAGTTTTAGCCAGAAGTACAGGCCCGTGTTCTTTGGTGAACTGATTGGGCAGAATATTGTGGTTCAGTCACTCATCAATGCTGTTTCAAGAGGCCGAATTGCTCCTGTTTATCTTTTTCAAGGTCCTCGTGGGACTGGTAAAACATCAACGGCTAGGATATTTGCTGCTGCCTTGAATTGTGTGGCTCCTGATGATAGTAAGCCTTGCGGCTACTGCAGGGAGTGCACTGAGTTCATTTCTGGCAAGAGCTGTGATCTACTGGAGGTTGATGGAACCAACAAGAAAGGAATCGATAGAGCTAGATATCTACTGAAAAGATTGTCAACCGGGTCATCATCAGCCTCCTCACGATACACAGTTTTTGTTATTGATGAGTGTCACCTTTTACCCTCCAAGACATGGCTGGGGCTACTCAAGTTTCTGGAAGAACCGCCTCAACGTGTTGTGTTCATATTTATCACATCTGATCTTGACAACGTGCCACGAACAATACAATCTCGATGCCAGAAGTACCTTTTTAACAAAATTAAAGACGGGGATATAGTAGATCGATTGAGGAAAATATCTGCTCAGGAGAATCTTGATGTTGAAACAGATGCATTGGACCTCATTGCTACAAATGCAGATGGTTCACTTCGAGATGCAGAAACAATGTTAGAACAGCTTAGTTTGCTGGGAAAAAGAATTACTACTTCTCTTGTCAATGAACTTGTGGGAGTTGTTTCAGATGAAAAATTGTTGGAACTTTTGGAGTTAGCAATGTCATCAGACACTGCAGAGACGGTGAAAAGAGCCAGAGAATTGATGGACTCTGGAGTTGATCCAATGGTGTTGATGTCTCAACTAGCTGGCCTCATTATGGACATCATTGCTGGATCATATACTGTCATTGATGCCAAACCTGATGACTCATTCTCTGGTGGACGGAACTTGAATGAATCAGAGTTGGAGAGGTTAAAGCATGCTCTGAAGCTTCTCTCAGAGGCTGAGAAACAGTTAAGGACTTCCAGTGAACGCTCAACATGGTTCACAGCAACTCTGTTACAGCTTGGTTCTATGCCTTCGCCAGATCTTACTCAGTCTGGCAGTAGCAGGAGGCAGAGCTGCAAAACAACTGAAGATGATCCATCTAGTGCTTCAAGAGACGGTACTGCTTCCAAGCATAAGTCTGACATTCAATATTTGCCTCGGAAGTCAATATCCCCTGCATCCCATCAAAAAGCAGTGAAGGGCAATCCTGGCCATCAAAAGGATATATCCTCAAAATCCAGGCCGTCTAATAGCCCAGTCATAGATGATGGCTCCATCATTGTCTCATCTGATGATCTTATGGTTGGGAATACAATGTTTAGATGCATAGATTCTGGAAAGTTACATGATATCTGGGCGCGTTGTATTGGGAGGTGTCACTCCAAGACATTGAGGCAGCTTCTACACAATCATGGAAAGCTTGTGTCCATATGTGAAGTTGAAGGTGTTCTGGTAGCATATGTTGCATTTAGGGATGGAGATATTAAACTTAGGGCTGAGAGGTTTTTGAGAAGTATCACAAACTCCATGGAAATGGTTCTAAGGTGCAATGTAGATGTCAGAATTGTCCACTTGCCTGATGGTGAAGGTGAAAATCAGGCTAGTCTACCAGGTCTAAGGGAGGCAGAGTCCACAGTGGCAAGCGAGAAGGAACAAAGAGGAGATCGCATGAATGGGACAGGGTCTTATCCTAGTTTTCCTCCTTTGCTGGATGGAGATCTTCAATCTGCCCCCAATTCATCTGATATTGTGACTGAAAGAAATGGTGTGAGGGAGAGAAGACAAGATAATCCAATGCAGAGAATTGAATCCATCATTCGTGAGCAGAGGCTGGAAACTGCATGGTTACAGGCTGTAGAAAAAGGTTCCCCGGGGTCATTGAGTCGATTGAGGCCTGAGAAGAATCAGGTCCTTCCACAGGATGGTATCTATTGCATAGACCCAGTGGAGTCCATGGATTCTACAAGATTCTCCTCTCATCAGCAATGGGAAGATGACCTGAGTAATGAAGTCAAAGGTTTGAGCATTAGAAATGGAAGGATCTTACAGAAGGATCAGACCGGTAGAAGGGCAGATCGTTATCCCATGTCCCCGAGTTTATTGCATGACAGCAGTTTAGCAACAAGTTCTGTCAAAGACAATCTGGGATATGAATCGAGCTCCGGAGCTGGTGGTTGTGGATTTTTGTGTTGGAATAACGCCAAGCCTAGAAGGGCATTAAAGGTAAAAGGTACACCAGTTGGAGCGCGTAAAGCTGGCCGTTTTTCATTGTTTGGGGAGTGTGGTAAGCAAAGGAAAAATGGCTTTACAAGATAA 3801 0.4683 MSEMRVSDPSKLHLKKELTQIRKAARVLRDPGTTSSWKKSPLSSSRSVPPPPPSACTANNNGSTRFTHTSQLDSRSSSVAANSGKEKRVFLYNWKSHKSSSEKSGVAKYNNEEEEEEEDEEEEDGDGRNEGSSSSLLGSFEDSLSDARNGCDSKSDTYMGGGARSSSIFRRGDASLASLATPAARRAVPPKKKSKKSNALSLSLSHLDLLAKYQHRDRDRDGDGDISLNLGGKPLFKSNALLDSDDTEDYSNSEDVRRGSGTSPLLLKLKHKNWSRSSSKLLRRSRKEDSSYSYSTPALSTSSYNRYAHRYPSTVGSWDGTTTSMNDGDDEIDDHLDLPGRQGCGIPCYWSKRTPKHRGMCGSCYSPSLSDTLRRKGSSILCGGQTIYPRHRRSSAASHKRRISLRSAQGVIPLLTNSGDARGGSSIGTGRSDDELSTNFGELDLEGLSRLDGRRWSSSCRSQEGLEIVALNGDGEEEGTPENSRSFSQKYRPVFFGELIGQNIVVQSLINAVSRGRIAPVYLFQGPRGTGKTSTARIFAAALNCVAPDDSKPCGYCRECTEFISGKSCDLLEVDGTNKKGIDRARYLLKRLSTGSSSASSRYTVFVIDECHLLPSKTWLGLLKFLEEPPQRVVFIFITSDLDNVPRTIQSRCQKYLFNKIKDGDIVDRLRKISAQENLDVETDALDLIATNADGSLRDAETMLEQLSLLGKRITTSLVNELVGVVSDEKLLELLELAMSSDTAETVKRARELMDSGVDPMVLMSQLAGLIMDIIAGSYTVIDAKPDDSFSGGRNLNESELERLKHALKLLSEAEKQLRTSSERSTWFTATLLQLGSMPSPDLTQSGSSRRQSCKTTEDDPSSASRDGTASKHKSDIQYLPRKSISPASHQKAVKGNPGHQKDISSKSRPSNSPVIDDGSIIVSSDDLMVGNTMFRCIDSGKLHDIWARCIGRCHSKTLRQLLHNHGKLVSICEVEGVLVAYVAFRDGDIKLRAERFLRSITNSMEMVLRCNVDVRIVHLPDGEGENQASLPGLREAESTVASEKEQRGDRMNGTGSYPSFPPLLDGDLQSAPNSSDIVTERNGVRERRQDNPMQRIESIIREQRLETAWLQAVEKGSPGSLSRLRPEKNQVLPQDGIYCIDPVESMDSTRFSSHQQWEDDLSNEVKGLSIRNGRILQKDQTGRRADRYPMSPSLLHDSSLATSSVKDNLGYESSSGAGGCGFLCWNNAKPRRALKVKGTPVGARKAGRFSLFGECGKQRKNGFTR* 1267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g3158 1266 MobiDBLite consensus disorder prediction 1025 1058 - -
Aev01g3158 1266 MobiDBLite consensus disorder prediction 838 917 - -
Aev01g3158 1266 PANTHER REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT 208 1206 - -
Aev01g3158 1266 Coils Coil 106 126 - -
Aev01g3158 1266 SMART AAA_5 518 680 IPR003593 -
Aev01g3158 1266 Pfam DNA polymerase III subunits gamma and tau domain III 715 838 IPR022754 GO:0003887
Aev01g3158 1266 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 510 708 IPR027417 -
Aev01g3158 1266 CDD HLD_clamp_pol_III_gamma_tau 661 724 IPR045085 -
Aev01g3158 1266 SUPERFAMILY post-AAA+ oligomerization domain-like 732 833 IPR008921 GO:0003677|GO:0006260
Aev01g3158 1266 MobiDBLite consensus disorder prediction 111 127 - -
Aev01g3158 1266 Gene3D - 663 724 - -
Aev01g3158 1266 MobiDBLite consensus disorder prediction 415 435 - -
Aev01g3158 1266 MobiDBLite consensus disorder prediction 838 852 - -
Aev01g3158 1266 Gene3D - 478 659 IPR027417 -
Aev01g3158 1266 MobiDBLite consensus disorder prediction 24 165 - -
Aev01g3158 1266 MobiDBLite consensus disorder prediction 57 83 - -
Aev01g3158 1266 MobiDBLite consensus disorder prediction 901 917 - -
Aev01g3158 1266 MobiDBLite consensus disorder prediction 853 879 - -
Aev01g3158 1266 Pfam DNA polymerase III, delta subunit 501 661 - -
Aev01g3158 1266 PANTHER PROTEIN STICHEL-LIKE 1 208 1206 - -
Aev01g3158 1266 Gene3D - 725 839 - -
Aev01g3158 1266 MobiDBLite consensus disorder prediction 243 262 - -
Aev01g3158 1266 TIGRFAM dnaX_nterm: DNA polymerase III, subunit gamma and tau 486 835 IPR012763 GO:0003887|GO:0005524|GO:0006260|GO:0009360
Aev01g3158 1266 CDD AAA 500 658 - -
Aev01g3158 1266 Coils Coil 797 824 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g3158 Aev-Chr1 32532171 32537484 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g3158 482 776 Core DNA Replication Machinery Family AT1G21690 24.342 1.05e-15 78.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g3158 - - adu:107471079 1838.93