Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g3157 ATGGAAGGGATACCGCACCCAATACCGAGAACAGTTGAGGAGGTTTTCAGCGACTTTAAGGGCAGGCGAGCTGGATTGATTAAGGCTCTCACCTCTGACGTTGATAAGTTTTACCAGCAGTGCGATCCTGAGAAGGAGAATTTGTGTCTATATGGATTTCCAAATGAAACGTGGGAAGTGAACTTGCCTGTTGAAGAAGTGCCTCCTGAACTTCCTGAGCCAGCATTAGGCATAAACTTTGCCAGAGATGGCATGCAAGAGAAGGATTGGTTATCACTGGTTGCAGTTCACAGTGACTCGTGGCTGCTTGCTGTTGCTTTCTATTTTGGTGCTCGCTTTGGCTTTGGTAAGAATGAAAGGAAAAGGCTTTTCCAGATGATAAATGATCTGCCAACTATCTTTGAAATTGTGACAGGAAGTGCTAAGCAATCAAAGGACCAAGCAGCTGCTCACAACAATGGTGGTAGCAAATGCAAATCAAGTGGAAAGTCTCGTCAGTCAGAGACTCAGGCCAAGGGAGTGAAGATGTCTGCACCACCCAAAGAAGAGGATGAGAGTGGAGAGGAAGAGGAGGAGGATGACGAACAAGGTGCAACATGTGGTGCTTGTGGTGATAATTATGGCAATGATGAATTCTGGATTTGCTGTGATATGTGTGAGAGATGGTTCCATGGGAAATGTGTGAAAATCACTCCTGCTAAGGCTGAGCATATCAAGCAATACAAGTGCCCAAGCTGCAGTAACAAGAGGGCTAGAGTTTGA 762 0.4567 MEGIPHPIPRTVEEVFSDFKGRRAGLIKALTSDVDKFYQQCDPEKENLCLYGFPNETWEVNLPVEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDSWLLAVAFYFGARFGFGKNERKRLFQMINDLPTIFEIVTGSAKQSKDQAAAHNNGGSKCKSSGKSRQSETQAKGVKMSAPPKEEDESGEEEEEDDEQGATCGACGDNYGNDEFWICCDMCERWFHGKCVKITPAKAEHIKQYKCPSCSNKRARV* 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g3157 253 MobiDBLite consensus disorder prediction 183 198 - -
Aev01g3157 253 PANTHER CPG BINDING PROTEIN 1 253 IPR045104 GO:0006355|GO:0042393
Aev01g3157 253 Pfam PHD-finger 200 249 IPR019787 -
Aev01g3157 253 SMART PHD_3 199 247 IPR001965 -
Aev01g3157 253 SUPERFAMILY FYVE/PHD zinc finger 188 250 IPR011011 -
Aev01g3157 253 ProSitePatterns Zinc finger PHD-type signature. 200 246 IPR019786 -
Aev01g3157 253 ProSiteProfiles Zinc finger PHD-type profile. 197 249 IPR019787 -
Aev01g3157 253 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 189 248 IPR013083 -
Aev01g3157 253 CDD PHD_AL_plant 200 249 IPR044104 -
Aev01g3157 253 PANTHER PHD FINGER PROTEIN ALFIN-LIKE 6 1 253 - -
Aev01g3157 253 Pfam Alfin 11 138 IPR021998 GO:0006355|GO:0042393
Aev01g3157 253 MobiDBLite consensus disorder prediction 145 173 - -
Aev01g3157 253 MobiDBLite consensus disorder prediction 145 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g3157 Aev-Chr1 32524392 32528277 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g3157 1 250 Alfin-like Transcription Factor Family AT1G14510 82.800 4.41e-134 376
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Alfin-like Aev01g3157 Alfin 1.6e-69 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g3157 - - gmx:100807826 469.929