Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g3155 ATGGCAATTGCAGCGGCGGGGTCATCATCATCATCGCCCACCATGAGCCTCAGCCACAGCCACAGCCACGAAGACCACGCCTCCACCACCAACGAAGACAACAACCACAACCACCTTAACCTCAATAATAACAACAACAACATCAACAACGCCAACACGAACAAGGCCTCAGAAGATGATGATGATGATCACGAGCAGGACATGGTGATGCCTGGGTTTCGGTTCCACCCAACTGAAGAGGAGCTGGTGGAGTTCTACCTTCGCCGTAAGGTCGAGGGAAAGCGCTTCAACGTCGAGCTCATTACTTTCCTTGATCTTTATCGCTATGACCCTTGGGAGCTTCCTGGTTTGGCAGCAATAGGGGAGAAGGAGTGGTACTTCTATGTGCCCCGAGACAGGAAGTACAGGAACGGAGATCGGCCGAATCGAGTGACAACGTCAGGGTACTGGAAGGCAACGGGAGCAGACCGGATGATAAGGACAGACAACTTCAGGTCCATCGGCCTCAAGAAAACCCTAGTCTTCTATTCTGGCAAAGCTCCCAAAGGCATCCGTACCAGTTGGATTATGAACGAGTATCGCCTCCCCCAACATGACACCCAACGCTATCAAAAGGCAGAGATATCGCTGTGCCGAGTATACAAGAGAGCGGGAGTGGAAGACCATCCGTCGCTGCCTCGGTGCCTGCCAACGCGGGGGGGCCCATCAAGGCCTGACAGTAGTAGTAATAATAATAGTAAGAAGCACACTAGCATTGAGGAGATGGTTCAGCACCAGCACCAGCACCAGCACCAGCACCAGCTAATTAACAACATGGGATTTGCTGCCGCTGCTGCTGACAATAATCATAATAAGATGATGATGATGAACGAAACCGAGGGAAGCAGCAGCACCGCCAACAACAATTCTAGTACTGCAGATCATCATCATGTGACCACAGCTCTTGGCCTCTCCAAACACCACATTAATACTAATACTAATAATAATAACAGTGCTAATTACCATCCTCATCATCACCACCGTGCTGCTGCAATATTGGGGGTGCCACCAGCAGTGGTTCCCATGGAGGACAATACTGAAGCAGCGTTGATGATGATGATGCAGCATTCCAAGCAAGCAGGAGCAGGAGCTAATAATATGAGCACTACTAGTCTGGTGGTGCCGGCCTTAAGCTTCTTCCCCCCAGCACCTAATTCATCAAACACCAATAATAGTAATAACAGCCAGATAATGATGGAAGAACTCAACAGGCTCCTCACTTATCAACAGCAGCAGCAGTACTACAACAGCAGTACTTCCAACAATACTAATAATCATCAGTTCTCCAGTTTGCTCATGATGCAGCAGCAGCCGCCACCACCACCAGCACCTGCAGCTCCAATGGCCTCGCTTCCAACCAGCTTCTCTGACCGACTCTGGGACTGGAACCCACTCCTCCCTCCTGATCAACCAAACCACCGCGACTACACCAACATGTCCACCTTCAAGTAA 1491 0.503 MAIAAAGSSSSSPTMSLSHSHSHEDHASTTNEDNNHNHLNLNNNNNNINNANTNKASEDDDDDHEQDMVMPGFRFHPTEEELVEFYLRRKVEGKRFNVELITFLDLYRYDPWELPGLAAIGEKEWYFYVPRDRKYRNGDRPNRVTTSGYWKATGADRMIRTDNFRSIGLKKTLVFYSGKAPKGIRTSWIMNEYRLPQHDTQRYQKAEISLCRVYKRAGVEDHPSLPRCLPTRGGPSRPDSSSNNNSKKHTSIEEMVQHQHQHQHQHQLINNMGFAAAAADNNHNKMMMMNETEGSSSTANNNSSTADHHHVTTALGLSKHHINTNTNNNNSANYHPHHHHRAAAILGVPPAVVPMEDNTEAALMMMMQHSKQAGAGANNMSTTSLVVPALSFFPPAPNSSNTNNSNNSQIMMEELNRLLTYQQQQQYYNSSTSNNTNNHQFSSLLMMQQQPPPPPAPAAPMASLPTSFSDRLWDWNPLLPPDQPNHRDYTNMSTFK* 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g3155 496 SUPERFAMILY NAC domain 69 215 IPR036093 GO:0003677|GO:0006355
Aev01g3155 496 MobiDBLite consensus disorder prediction 235 250 - -
Aev01g3155 496 MobiDBLite consensus disorder prediction 1 69 - -
Aev01g3155 496 MobiDBLite consensus disorder prediction 221 255 - -
Aev01g3155 496 Gene3D NAC domain 78 219 IPR036093 GO:0003677|GO:0006355
Aev01g3155 496 PANTHER NAC DOMAIN-CONTAINING PROTEIN 72-LIKE 43 483 - -
Aev01g3155 496 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 43 483 - -
Aev01g3155 496 MobiDBLite consensus disorder prediction 33 54 - -
Aev01g3155 496 MobiDBLite consensus disorder prediction 476 496 - -
Aev01g3155 496 Pfam No apical meristem (NAM) protein 71 195 IPR003441 GO:0003677|GO:0006355
Aev01g3155 496 ProSiteProfiles NAC domain profile. 69 216 IPR003441 GO:0003677|GO:0006355
Aev01g3155 496 MobiDBLite consensus disorder prediction 1 18 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g3155 Aev-Chr1 32507780 32509931 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g3155 68 232 NAC Transcription Factor Family AT2G02450 89.697 1.05e-111 335
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Aev01g3155 NAM 4e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g3155 - - gmx:100812779 432.565