Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Aev01g3143 | ATGAAACGAATCGATGATGTCACCGCCACCGCCACCGCCGCCACTGCAGCCAAGCCAGTCTTCCTAACCAAAGCCCAGCGCGAGCAGTTAGCTCTCCAGCGCCGCCACGAAGAAATTGCTGAGCAGAAGCGCCGCCAGGAGCAGCTCCTCTCCCGTAACCGCCCCTCCGATTCCTCTGCCGATCCCAAACCCTCCTCCGATCCCGACCGCCGTGACCGCGACCGAGATAGAGATAGGGATAGGGACAGAGACAGAGATAGAGACAGGGACAGGGACAGGGACAGGGACCGTGACCGCGAGCGAGACAGAGAACGGGAACGGGAAAAGGAACGAGAGCGCGATAGGGCACGCGATCGGGACCGCGAAACGGAGAGGCGTAACCGTGAGAGGGAGCGCGAAGAGGAAGGTAGGGCTCGGGAGCGAGCACGGCTCGAGAAATTGGCGGAGCGTGAGCGGGAGAAGGAGCTTGATGCCATAAAGGAGCAGTACCTGGGGTCGAAGAAGCCGAAGAAGCGCGTGATTAAGCCTAGCGAGAAGTTCCGGTTCTCGTTTGACTGGGAGAACACGGAGGACACCTCCCGCGACATGAACGCCCTCTATCAGAACCCTCACGAGGCCCAGCTCCTCTTCGGCCGCGGCTTCCGCGCCGGAATGGACCGCCGTGAGCAGAAGAAGCTCGCCGCCAAGAACGAGAAGGAGATGCGCGAGCAGATTCGCAAGAAGGACGGCGTCGAGGAGAAGCCTGAGGAGGCCGACGCCCAGCGTCGCAAGGAGGCCGCCGCGGACCTGTACGATACGTTCGACATGCGCGTGGACCGCCACTGGAGCGAGAAGAAGCTGGAGGAGATGACGGAGAGGGACTGGCGCATCTTCAGGGAGGACTACAACATCTCGTACAAGGGTTCCAAAATCCCTCGCCCTATGCGGAGCTGGGTTGAGAGCAAGCTCAGCCTCGAGCTCTTGAAGGCTGTGGAGAAAGCTGGGTACAAGACCCCTTCTCCCATTCAGATGGCCGCTATTCCTCTTGGGCTGCAGCAGCGCGATGTTATCGGCATTGCAGAGACCGGTTCTGGTAAGACCGCTGCTTTTGTTCTTCCTATGTTGAGTTACATCACTAGGCTTCCTCCCATGAGCGAGGAGAATGAGGCGGAGGGCCCCTATGCTGTTGTCATGGCTCCTACTCGCGAGCTCGCCCAGCAGATTGAGGATGAGACTGTCAAGTTTGCCCAGTATTTGGGAATCAAGGTTGTGTCGATTGTTGGTGGGCAGTCTATTGAGGAACAAGGGTTCAAGATCAGGCAAGGTTGTGAGATCGTCATTGCCACTCCTGGTCGTTTGATCGATTGCTTGGAGCGCCGCTATGCTGTGCTGAACCAGTGTAATTATGTTGTTCTTGATGAGGCTGACCGCATGATTGATATGGGTTTTGAGCCACAGGTGATGGGTGTGTTGGATGCCATGCCTTCCAGCAATTTGAAACCTGAGAACGAAGATGAAGAGCTTGATGAGAAGAAGATCTATCGGACCACTTATATGTTCAGCGCCACCATGCCTCCGGCAGTGGAGAGGCTTGCTAGGAAGTATCTGAGGAACCCTGTCGTGGTCACCATTGGCACAGCTGGAAAGGCAACTGACTTGATCAGCCAGCATGTGATCATGATGAAGGAATCCGAGAAATTCCATAAGCTGCAGAGACTGCTTGACGAGCTGAATGACAAGACTGCTATTGTGTTTGTTAACACCAAGAAGAATGCGGACATGGTTGCCAAGAATCTGGACAAGGAAGGGTATCGCGTGACTACATTGCACGGTGGGAAGTCGCAGGAGCAGAGAGAGATCAGTCTGGAAGGGTTTAGGACCAAGAGATACAATGTTCTTGTTGCAACGGATGTTGCAGGGCGTGGGATTGACATACCTGATGTGGCTCACGTCATAAACTATGATATGCCTGGGAATATTGAGATGTACACTCACCGTATCGGACGTACTGGACGTGCAGGAAAGACCGGTGTGGCTACGACATTCCTCACTCTGCAGGACAGTGATGTCTTCTATGACCTCAAACAGATGCTTATTCAGAGCAACAGCCCTGTTCCACCTGAATTGGCGAGGCACGAAGCCTCCAAGTTCAAGCCAGGGAGTATTCCTGACAGACCGCCTAGACGGAATGACACGGTGTTTGCACATTGA | 2190 | 0.5521 | MKRIDDVTATATAATAAKPVFLTKAQREQLALQRRHEEIAEQKRRQEQLLSRNRPSDSSADPKPSSDPDRRDRDRDRDRDRDRDRDRDRDRDRDRDRDRERDREREREKERERDRARDRDRETERRNREREREEEGRARERARLEKLAEREREKELDAIKEQYLGSKKPKKRVIKPSEKFRFSFDWENTEDTSRDMNALYQNPHEAQLLFGRGFRAGMDRREQKKLAAKNEKEMREQIRKKDGVEEKPEEADAQRRKEAAADLYDTFDMRVDRHWSEKKLEEMTERDWRIFREDYNISYKGSKIPRPMRSWVESKLSLELLKAVEKAGYKTPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLSYITRLPPMSEENEAEGPYAVVMAPTRELAQQIEDETVKFAQYLGIKVVSIVGGQSIEEQGFKIRQGCEIVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVMGVLDAMPSSNLKPENEDEELDEKKIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATDLISQHVIMMKESEKFHKLQRLLDELNDKTAIVFVNTKKNADMVAKNLDKEGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTLQDSDVFYDLKQMLIQSNSPVPPELARHEASKFKPGSIPDRPPRRNDTVFAH* | 730 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Aev01g3143 | 729 | Coils | Coil | 99 | 157 | - | - | |
Aev01g3143 | 729 | CDD | SF2_C_DEAD | 547 | 676 | - | - | |
Aev01g3143 | 729 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 385 | 688 | IPR027417 | - | |
Aev01g3143 | 729 | CDD | DEADc_DDX23 | 320 | 536 | - | - | |
Aev01g3143 | 729 | MobiDBLite | consensus disorder prediction | 223 | 257 | - | - | |
Aev01g3143 | 729 | SMART | helicmild6 | 586 | 667 | IPR001650 | - | |
Aev01g3143 | 729 | Coils | Coil | 553 | 573 | - | - | |
Aev01g3143 | 729 | MobiDBLite | consensus disorder prediction | 704 | 729 | - | - | |
Aev01g3143 | 729 | Gene3D | - | 540 | 727 | IPR027417 | - | |
Aev01g3143 | 729 | SMART | ultradead3 | 328 | 550 | IPR014001 | - | |
Aev01g3143 | 729 | Coils | Coil | 22 | 42 | - | - | |
Aev01g3143 | 729 | MobiDBLite | consensus disorder prediction | 33 | 172 | - | - | |
Aev01g3143 | 729 | PANTHER | - | 91 | 722 | - | - | |
Aev01g3143 | 729 | ProSitePatterns | DEAD-box subfamily ATP-dependent helicases signature. | 464 | 472 | IPR000629 | - | |
Aev01g3143 | 729 | Pfam | DEAD/DEAH box helicase | 334 | 524 | IPR011545 | GO:0003676|GO:0005524 | |
Aev01g3143 | 729 | MobiDBLite | consensus disorder prediction | 697 | 729 | - | - | |
Aev01g3143 | 729 | ProSiteProfiles | Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. | 340 | 535 | IPR014001 | - | |
Aev01g3143 | 729 | MobiDBLite | consensus disorder prediction | 33 | 51 | - | - | |
Aev01g3143 | 729 | MobiDBLite | consensus disorder prediction | 63 | 168 | - | - | |
Aev01g3143 | 729 | Coils | Coil | 221 | 247 | - | - | |
Aev01g3143 | 729 | ProSiteProfiles | Superfamilies 1 and 2 helicase C-terminal domain profile. | 562 | 706 | IPR001650 | - | |
Aev01g3143 | 729 | ProSiteProfiles | DEAD-box RNA helicase Q motif profile. | 309 | 337 | IPR014014 | GO:0003724 | |
Aev01g3143 | 729 | Gene3D | - | 270 | 539 | IPR027417 | - | |
Aev01g3143 | 729 | Pfam | Helicase conserved C-terminal domain | 559 | 667 | IPR001650 | - | |
Aev01g3143 | 729 | PANTHER | ATP-DEPENDENT RNA HELICASE DBP3 | 91 | 722 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Aev01g3143 | Aev-Chr1 | 32398073 | 32400262 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Aev01g3143 | 319 | 703 | Eukaryotic Initiation Factors Gene Family | AT1G72730 | 32.902 | 5.12e-60 | 206 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Aev01g3143 | K12858 | - | gmx:100799264 | 1131.32 |