Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g3136 ATGATTCGACGTAACCTACGGGTGTCGGTCACATCGATCAGTGTCCCTGCTGTTCGTGACCGGCTATTGCCTGGTTCCTCGTTTGGATCGCCCGGTGCGACACGTTGGCTCGAAGGAGTTGAGCACTATAAATCTCTCTCTCTCGACACTTGCCATCAACTACGTACGACTCTCTCTCCCATTCCTAGCTCACTCGATCTGCATTCAATGGAAACTGGAGGAGCCTTTCATGGCTACCGCAAGCTCCCCAACACTAACTCTGCTCCTGGAGGAGGGGTGCTGAAGTCAGATCAGATGAAGAACAGCAACAGCAACAACAACTCGAACTCGAACTCGAACTCGAACGGAGGAGATGAGAGCGAGTGCACAGTGAGGGAGCAGGACCGGTTCATGCCGATAGCGAATGTGATAAGGATAATGCGGAAGATCCTGCCAGCGCACGCGAAGATCTCGGACGACGCGAAGGAGACAATCCAGGAGTGCGTGTCGGAGTACATCAGCTTCATCACGGGGGAGGCCAACGAGCGGTGCCAGAGGGAGCAGCGCAAGACTATCACGGCGGAGGACGTGCTGTGGGCCATGAGCAAGCTCGGCTTCGACGACTACATCGAGCCTCTCACCATCTACCTTCACAGGTTCCGCGACCTCGAGGGCGACCGCACCTCCTCCATCAGGCAGCCCGACCCTCTCGCCGCCAAGCGGACCCTCCTCGACTACGCCCCTCCTCCTCTCGGGGCGGCTGCATTTGTGCCGCACCAGTTTCACATTCCCCATCCTCATCCTAATGGGTATTTTGGTGCACCCACTTACATGAGGCCAGCAGGAGGATCTTCTCATCATCATCAACCCTCTTCCCTCACAGATAGTAATAATAATAACAATGCTGAAACCTGCAATAATGGTGGTCAATATAAGTGA 918 0.5501 MIRRNLRVSVTSISVPAVRDRLLPGSSFGSPGATRWLEGVEHYKSLSLDTCHQLRTTLSPIPSSLDLHSMETGGAFHGYRKLPNTNSAPGGGVLKSDQMKNSNSNNNSNSNSNSNGGDESECTVREQDRFMPIANVIRIMRKILPAHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTITAEDVLWAMSKLGFDDYIEPLTIYLHRFRDLEGDRTSSIRQPDPLAAKRTLLDYAPPPLGAAAFVPHQFHIPHPHPNGYFGAPTYMRPAGGSSHHHQPSSLTDSNNNNNAETCNNGGQYK* 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g3136 305 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 130 194 IPR003958 -
Aev01g3136 305 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT B-6 65 230 - -
Aev01g3136 305 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 65 230 IPR027113 GO:0001228|GO:0006355|GO:0016602
Aev01g3136 305 SUPERFAMILY Histone-fold 127 229 IPR009072 GO:0046982
Aev01g3136 305 Gene3D Histone, subunit A 116 235 IPR009072 GO:0046982
Aev01g3136 305 MobiDBLite consensus disorder prediction 278 305 - -
Aev01g3136 305 MobiDBLite consensus disorder prediction 268 305 - -
Aev01g3136 305 MobiDBLite consensus disorder prediction 78 123 - -
Aev01g3136 305 PRINTS CCAAT-binding transcription factor subunit A signature 196 214 - -
Aev01g3136 305 PRINTS CCAAT-binding transcription factor subunit A signature 177 195 - -
Aev01g3136 305 PRINTS CCAAT-binding transcription factor subunit A signature 158 176 - -
Aev01g3136 305 ProSitePatterns NF-YB/HAP3 subunit signature. 161 177 IPR003956 GO:0005634|GO:0006355|GO:0043565
Aev01g3136 305 MobiDBLite consensus disorder prediction 89 120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g3136 Aev-Chr1 32352219 32355190 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g3136 70 264 CCAAT-HAP3 Transcription Factor Family AT5G47670 62.019 6.63e-77 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Aev01g3136 CBFD_NFYB_HMF 1.6e-25 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g3136 K08065 - gmx:100194424 259.225