Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g3125 ATGAACAAGAACCACGGAACAGGGGTTTCTGTTCTTCCACCCCACAGGAGAGAGAGAGACATCGTCTACTCTAGAAGGGTACGGTCAAGTGCCATGGCATGGCTTGATGAGGTAGGAGGTGTGCTAACATGTGAAGGTTTTGGCAGCAATTCGATGGGTAACGACGATGAGGCTCGGCAGTCACTGCTATTGGAGTCAAGAGATCATTCTCTTGTCAATGAGAAAAGTGATCTCCAGAGAAGGAGGACCCGCCATGGCACTGTTTCAGACCCAGAAATCAATCTCTACCAGCATAACACTACTGTCCAAACCCCCTCAGGCCCAGCTCGGACACCATCCCAATCTGTAACTGCAAAATCACCACCACTACCAGAATTCGATTTCAAGCCAGTGTACTTCTGGCTAGCTGCTTACCTCGGAGGAGGCACCCTCTGTTTCTTTCTCACAGGTTATCAAATCCAAGGTATCAAAACCAATGGATTTCTAGATGCACTTTACTTCTGTGTTGTGACTATGACCACTGTTGGATACGGAGATCTTGTGCCTCAGAGCTCGACCACAAAACTGCTAGCATGCTTCTATGTCTTCATCGGCATGGCTCTCGGCGGGTTGATTCTCGGCAAGGCAGCAGACTTCGTTGTGGAGAAGCAGGAAATGTTGCTAGTCAGTGCCATGAATAAGGATAGAATGTCTGCTGGCTCGGTAGAGCTGCCGAAAGAGTTTCGAAGCAGAAGGGCCAAAAACAAATTCATAGTGGCAGTTGGCACCTTTCTAACGCTTATGATATTAGGTACTTTGTTTCTGTATTTTGTTGAAAAGTTAGATTTTGTGGATGCTTTCTACTGCGTTTGCTCAACGGTGACTACATTGGGGTATGGTGATAAGAGCTTCTCAAGTACAATTGGACGCACTTTTGCCGTGTTCTGGATATTGAGCAGCACCATCTGCCTAGCTCAGTCATTCGCCTATCTTGCTGAACTCAGAACTGAAGACAGGCAGAGAGCACTCGCAAATTTGATCCTTACGCGGAAATTGTCGGTTCTTGATCTTGAGGCAGCAGATCTTGATGGAGACGACACTGTTAGTGTTGCAGAGTTTGTTGTGTACAAGTTGAAGGAAATGGGAAAGATTAGCATCGAAGACATATCAGAGGTGATGGAGATCTTTAGAAAACTTGACATTGATGAATCAGGAACCCTCACAGAGGCCGATCTCATCTCACAGATTCCCACTACTCTCGATCCCTACCTCGCACCAAAGCAGAGTGGCTGA 1272 0.4686 MNKNHGTGVSVLPPHRRERDIVYSRRVRSSAMAWLDEVGGVLTCEGFGSNSMGNDDEARQSLLLESRDHSLVNEKSDLQRRRTRHGTVSDPEINLYQHNTTVQTPSGPARTPSQSVTAKSPPLPEFDFKPVYFWLAAYLGGGTLCFFLTGYQIQGIKTNGFLDALYFCVVTMTTVGYGDLVPQSSTTKLLACFYVFIGMALGGLILGKAADFVVEKQEMLLVSAMNKDRMSAGSVELPKEFRSRRAKNKFIVAVGTFLTLMILGTLFLYFVEKLDFVDAFYCVCSTVTTLGYGDKSFSSTIGRTFAVFWILSSTICLAQSFAYLAELRTEDRQRALANLILTRKLSVLDLEAADLDGDDTVSVAEFVVYKLKEMGKISIEDISEVMEIFRKLDIDESGTLTEADLISQIPTTLDPYLAPKQSG* 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g3125 423 SUPERFAMILY EF-hand 350 407 IPR011992 -
Aev01g3125 423 Gene3D - 234 336 - -
Aev01g3125 423 PRINTS Two pore domain K+ channel signature 170 198 IPR003280 GO:0005267|GO:0016020|GO:0071805
Aev01g3125 423 PRINTS Two pore domain K+ channel signature 288 297 IPR003280 GO:0005267|GO:0016020|GO:0071805
Aev01g3125 423 ProSitePatterns EF-hand calcium-binding domain. 393 405 IPR018247 -
Aev01g3125 423 ProSiteProfiles EF-hand calcium-binding domain profile. 380 415 IPR002048 GO:0005509
Aev01g3125 423 Gene3D - 342 413 - -
Aev01g3125 423 PANTHER OUTWARD RECTIFYING POTASSIUM CHANNEL PROTEIN 70 405 - -
Aev01g3125 423 SUPERFAMILY Voltage-gated potassium channels 241 345 - -
Aev01g3125 423 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 70 405 IPR003280 GO:0005267|GO:0016020|GO:0071805
Aev01g3125 423 SUPERFAMILY Voltage-gated potassium channels 133 218 - -
Aev01g3125 423 Pfam Ion channel 257 326 IPR013099 -
Aev01g3125 423 Pfam Ion channel 137 214 IPR013099 -
Aev01g3125 423 Gene3D - 127 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g3125 Aev-Chr1 32293146 32295916 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g3125 103 406 Ion Channels AT5G55630 55.592 1.25e-108 323
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g3125 K05389 - gmx:100799492 442.195