Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g3116 ATGCAAGCTGGTATCGATTTCTACTTCCAGCTACCTGTGCAAGGCATTTACCAAATGTTACAGAGCAATTTATGCCAAGATATCAATGATAACATCATGATCCAGGGAAGCAATAATATTTCTTTTGAATCCTGCAAGGACCAATACTTTACGCTTGATTCGTCCTCAGCAACCACTGATCTCGGAGGTTGTGATTCCTCTTCCTGTAGCAGTGTATTATCATCAAATAGGAGTCCATATTCCCCACAAGTTTCTCAGTCATCTGATAACACATATGGGACACCTATAAGCGGGAACTCTAGCATTGACAACGGGGATGATGAATTGAAGCACAGACTTAGAGAACTGGAGATTTCATTGTTGGGGTCTGATGAATCAGATGTTGCTGACAGTGGTGGCCGCTACGGTGCATCTCCATCAGCCAAATACGATTGGGATCAGATTGCAAAAATGATTCCAAAGTTTAAGCTGAGAGATGTCCTGATGCTTTGCGCACAGGCTGTGTCAGATGATGATATACCAAGAGCAATAGGTTGGATGGATAATGTTTTGGCGAAGATGGTATCGGTTTATGGGGATCCAATGCAGAGGTTGGGTGCTTACTTGTTGGAGGGGCTTAGAGCAAGGTTGGAATCATCAGGGAGTCTCATCTACAAATCCTTGAAGTGTGAGCAACCAACAGGCAAAGAACTAATGAGTTACATGCACATTTTGTATCAAATCTGCCCATATTGGAAGTTTGCATACATATCCGCCAACGCGGTCATTGCAGAAGCAATGGCAAATGAGTCCATGATTCATATAATTGATTTCCAAATTGCACAGGGCACACAGTGGCATATGCTCATTCAAGCTCTTGCAAGCAGGCCCGGGGGACCCCCATTCGTTCGTGTAACCGGCGTTGATGATTCGCAGTCGTTTCATGCTCGAGGTGGAGGACTTGAGATTGTGGGAGAACGTCTGTCAAATTTGGCAAGGTCTTGCGGAGTGCCATTCGAGTTCAACATTGCTGCAATGTGTGGCTCAGAAGTTGAAGGAGCAAACCTTGTGGTTCGACCAGGGGAAGCTCTTGCTGTGAATTTTCCTTATGTCCTGCACCACATGCCCGATGAGAGTGTGAGCACAGAGAACCACAGAGACAGAGTGATTAGATCGGTCAAGAGCTTATCTCCCAAGGTGGTGACACTTGTTGAGCAGGAATCCAACACGAACACTTCTTCTTTCTGTAACAGGTTTGCTGAGGCACTGGATTATTACACTGCTATGTTTGAATCAATAGATGTGGCTAGCCCAAGAGATTATAAGAAGCGGGTCAGTGCAGAGCAGCATTGTGTGGCGAGGGACATTGTTAACATGATAGCTTGCGAGGGGGCTGAGAGGGTGGAAAGACATGAGCTTCTTGGGAAGTGGAGGTCAAGATTTACTATGGCTGAGTTTCAACAAGTCCCATTGAGCTCTTCGGTGATGGTTGCTGTCCGAAATCTATTGATGAAGGAATTCAATGGAAATTACAGGCTTGAATATAGAGATGGTGCCTTGTATCTTGGCTGGATGAAGAGGGCTTTGGCCACCTCTTCATCTTGGAGGTGA 1590 0.4547 MQAGIDFYFQLPVQGIYQMLQSNLCQDINDNIMIQGSNNISFESCKDQYFTLDSSSATTDLGGCDSSSCSSVLSSNRSPYSPQVSQSSDNTYGTPISGNSSIDNGDDELKHRLRELEISLLGSDESDVADSGGRYGASPSAKYDWDQIAKMIPKFKLRDVLMLCAQAVSDDDIPRAIGWMDNVLAKMVSVYGDPMQRLGAYLLEGLRARLESSGSLIYKSLKCEQPTGKELMSYMHILYQICPYWKFAYISANAVIAEAMANESMIHIIDFQIAQGTQWHMLIQALASRPGGPPFVRVTGVDDSQSFHARGGGLEIVGERLSNLARSCGVPFEFNIAAMCGSEVEGANLVVRPGEALAVNFPYVLHHMPDESVSTENHRDRVIRSVKSLSPKVVTLVEQESNTNTSSFCNRFAEALDYYTAMFESIDVASPRDYKKRVSAEQHCVARDIVNMIACEGAERVERHELLGKWRSRFTMAEFQQVPLSSSVMVAVRNLLMKEFNGNYRLEYRDGALYLGWMKRALATSSSWR* 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g3116 529 MobiDBLite consensus disorder prediction 71 103 - -
Aev01g3116 529 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 10 528 - -
Aev01g3116 529 Pfam GRAS domain family 157 529 IPR005202 -
Aev01g3116 529 ProSiteProfiles GRAS family profile. 148 529 IPR005202 -
Aev01g3116 529 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 10 528 IPR005202 -
Aev01g3116 529 MobiDBLite consensus disorder prediction 71 106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g3116 Aev-Chr1 32259479 32261068 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g3116 34 529 GRAS Transcription Factor Family AT4G17230 58.103 0.0 586
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Aev01g3116 GRAS 1.1e-124 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g3116 - - aip:107636708 777.704
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g3116 01 32259479 32261068 Aev04g0099 04 634793 636439 PCT