Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g3088 ATGAAGCTCGACAACTGCAACGGCCAGATTTGCCCCGCCACCGAGTCCTTCGATGACGCCGACGCCGATGAGGTGTTCGTGCCGCCGCTCAACTTCGCCATGGTCGACCACGGCATTTTTCGCTCTGGTTTCCCTGATTCTGCCAACTTCGGATTCTTGAAATCCCTCCGTCTCCGATCCGTCATATGTTTATGCCCTGAACCATATCCTGAAGCGACCTCAGAATTTTTGAATGCCAACGGAATAAGGCTTTATCAATTCGGGATCGATGGCTGTAAGGAACCTTTTGTCAACATCCCAGATGATACAATCCGTGAAGCTTTGAAAGTAGTCCTCGATGTCAGGAACCACCCCCTGCTGATTCATTGTAAACGAGGGAAGCACCGCACTGGTTGCCTCGTGGGATGCATAAGAAGATTGCAGAGATGGTGCCTAACATCTGTTTTTGACGAGTACCAAAGGTTTGCTGGCGCCAAGGCCAGAGTGTCAGATCAGAGGTTCATCGAATTGTTCGACATTTCTTGTTTCAAGCACCACCCGCTGTCATTTTCATGCTCCAGGAGATAG 567 0.5009 MKLDNCNGQICPATESFDDADADEVFVPPLNFAMVDHGIFRSGFPDSANFGFLKSLRLRSVICLCPEPYPEATSEFLNANGIRLYQFGIDGCKEPFVNIPDDTIREALKVVLDVRNHPLLIHCKRGKHRTGCLVGCIRRLQRWCLTSVFDEYQRFAGAKARVSDQRFIELFDISCFKHHPLSFSCSRR* 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g3088 188 PANTHER - 13 187 - -
Aev01g3088 188 PANTHER TYROSINE-PROTEIN PHOSPHATASE 13 187 - -
Aev01g3088 188 Pfam Tyrosine phosphatase family 27 180 IPR004861 -
Aev01g3088 188 Gene3D Protein tyrosine phosphatase superfamily 25 175 IPR029021 -
Aev01g3088 188 ProSiteProfiles Dual specificity protein phosphatase domain profile. 31 183 IPR020422 GO:0006470|GO:0008138
Aev01g3088 188 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 26 173 IPR029021 -
Aev01g3088 188 PRINTS Plant and fungal dual specificity phosphatase signature 82 96 IPR020428 GO:0016791
Aev01g3088 188 PRINTS Plant and fungal dual specificity phosphatase signature 99 113 IPR020428 GO:0016791
Aev01g3088 188 PRINTS Plant and fungal dual specificity phosphatase signature 26 43 IPR020428 GO:0016791
Aev01g3088 188 PRINTS Plant and fungal dual specificity phosphatase signature 63 76 IPR020428 GO:0016791
Aev01g3088 188 ProSitePatterns Tyrosine specific protein phosphatases active site. 121 131 IPR016130 GO:0016311|GO:0016791
Aev01g3088 188 CDD PFA-DSP_Siw14 26 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g3088 Aev-Chr1 32130469 32133914 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g3088 1 188 Protein tyrosine phosphatase (PTP) family AT4G03960 67.016 5.28e-97 278
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g3088 K18045 - gmx:100785520 339.347