Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g3087 ATGGGGAAATCAGGGGGTAGAAGGAAGAAGGGTGGTGGTTCAGCTTCAAACCAAGCTTCTGTTGATAGTTCTACTCCAGCAGCTAATGGTGGGGCTGAGTTGGATTCCACAATTTTTTTGAAGAGAGCGAATGAGCTCAAAGATGAGGGGAATAAGAGATTCCAGAGCAAGGACTATGCTGGTGCCCTTGAGCACTATGAGAATGCTCTTCGGCTCACCCCAAAATCCCACCCTGACAGAGCCATTTTCCACAGCAATAAGGCTGCCTGTTTGATGCAAGTGAAGCCCATAGATTATGAGACTGTGATTGCTGAGTGCACCTTGGCCCTTCAGGTTCAGCCCCGGTTTGTCCGTGCACTTCTTCGGAGGGCACGAGCTTTCGAGGCTATTGGCAAGTACGAATTGGCTGTGCAAGATGTGCAGGCCTTGTTGGGAGCTGACCCTAACCACCGAGATGCTTTGGAGATTGCTCAGAGATTGAAGACCGCATTGGGACCACGGCAGGAGGCCCAGCAGGACCTCCAGAGTCGCCCCTCCCCTGCTGCCCTTGGAGCTTCTGCTGTACGCGGTGCACCTATTGCTGGTTTAGGGCCATGTTTGCCAGCCCGGCCTGTATCCAAGAAGGGTGCCAATTCAGCAGGGGCACCAGCTGTCTCACCTAACAACAAGCTAGACAAGTCACAACCAGTTTCACCTACTGCAAATGGTCCTGAGACCAAGTCTCAGTTGCCAAAACTTGTGTTGAAGCCTTCAAATTGTTCTACAAAGCCTCCTAACCAGAGAAACGACAACCAGAAGGAACAATCATCTCATTTCTCAACTATTCATAGACAGCATTTGGAGGTCACAGTTCGGATGAGACCATTGAAGCTTGTTTATGACCATGACATTAGGCTTTCCCAGATGCCAGTGAATTGCAGTTTTAGAGTGCTAAGAGATATTGTAAGCAAAAGATTTCCTTCATCAAATTCAGTTCTGATCAAGTATAAGGATAATGATGGTGATTTGGTGACTATAACCTCTACTGATGAACTAAGATTGGCAGAATCTAGTGCTGACAGCCATCTTATAAAAGAACCTGAAGCAGAAAAAAGTGATTCCTTTGGGATGCTGAGACTGCATATTGTTGATGTTAATCCTGAACAGGAGCCTCCTTTGTTGGAAGAAGAGGAAGAGAAACCTGTTGAGAGTGAAGGGATCAAAGGAGATGAGAGTGCATCTAATTCCTCCCTCAGTGAATCTGTCCCCGAAGTTCCTGATGCTGAAGTTGATAAGACAGGGAAGGATGCTCCAAAGGAAAAAGCAGGAACCACAGCAGATACAGAATGCAAAGAAGTGGAAATGGATGATTGGTTGTTTGAATTTGCTCAACTTTTCCGCTCACATGTTGGTATTGATCCAGATGCTCATATAGACTTGCATGAGCTTGGGATGGAGCTTTGTTCAGAGGCACTTGAGGAAACAGTAACTAGTGAAGAGGCTCAGGAACTCTTCAACAAGGCTGCTTCAAAGTTCCAGGAGGTGGCTGCTTTGGCATTCTTCAACTGGGGAAATGTTCACATGTGTGCAGCTAGGAAGAGGATACCGTTAGATGAGAATGCTGGGAAGGAGGTAGTGGCAGAGCAACTTCAAGTGGCTTATGACTGGGTCAAGGAAAAATATTCTTTGGCAAGAGAGAAGTATGAGGAAGCACTCTTGATCAAACCAGATTTCTATGAGGGGCTGTTGGCTCTCGGGCAGCAACAATTTGAAATGGCTAAACTTTATTGGTCTTTTGCACTTGCTAAGAAAATTGATCTATCAGGCTGGGATGCTACTGAGACCCTTGAACTATTTGACAGTGCGGAGAAGAAAATGAAAGCTGCAACTGATATGTGGGAGAAGCTGGAGGAACAGAGAGCTAAAGAGCTTAAGGACCCAAATGCGACAAAGAAAGAGGATATATTGAGAAGAAGAAAGAAAAAGGAAGGGGCTGCTGAAGCCGAGTCCTCCAGTGTTGGTGGTCAGGGTGATCTATCTGCAGAAGAAGCTGCTGAGCAAGCCGCTGTTATGAGATCCCAGATTCACCTCTTCTGGGGTAATATGCTTTTTGAAAGATCCCAAGTTGAATGCAAATTAGGAATGAGTGGTTGGAAGGAAAAGCTTGAAGCTGCCACTGAGCGCTTTAAGCTTGCTGGAGCTTCTGAAGCCGATATTTCAATGGTTCTAAAGAATCATTGCTCAAATGGAGATGCAAAAGAAGGAGATGACAAAAAGATTGAGAACTCACAACTCAATAAGTCTGGTGGAGTAGAGAACAATGAGGCTACTCAAATATCCGATAAGTGA 2328 0.4588 MGKSGGRRKKGGGSASNQASVDSSTPAANGGAELDSTIFLKRANELKDEGNKRFQSKDYAGALEHYENALRLTPKSHPDRAIFHSNKAACLMQVKPIDYETVIAECTLALQVQPRFVRALLRRARAFEAIGKYELAVQDVQALLGADPNHRDALEIAQRLKTALGPRQEAQQDLQSRPSPAALGASAVRGAPIAGLGPCLPARPVSKKGANSAGAPAVSPNNKLDKSQPVSPTANGPETKSQLPKLVLKPSNCSTKPPNQRNDNQKEQSSHFSTIHRQHLEVTVRMRPLKLVYDHDIRLSQMPVNCSFRVLRDIVSKRFPSSNSVLIKYKDNDGDLVTITSTDELRLAESSADSHLIKEPEAEKSDSFGMLRLHIVDVNPEQEPPLLEEEEEKPVESEGIKGDESASNSSLSESVPEVPDAEVDKTGKDAPKEKAGTTADTECKEVEMDDWLFEFAQLFRSHVGIDPDAHIDLHELGMELCSEALEETVTSEEAQELFNKAASKFQEVAALAFFNWGNVHMCAARKRIPLDENAGKEVVAEQLQVAYDWVKEKYSLAREKYEEALLIKPDFYEGLLALGQQQFEMAKLYWSFALAKKIDLSGWDATETLELFDSAEKKMKAATDMWEKLEEQRAKELKDPNATKKEDILRRRKKKEGAAEAESSSVGGQGDLSAEEAAEQAAVMRSQIHLFWGNMLFERSQVECKLGMSGWKEKLEAATERFKLAGASEADISMVLKNHCSNGDAKEGDDKKIENSQLNKSGGVENNEATQISDK* 776
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g3087 775 Coils Coil 612 632 - -
Aev01g3087 775 MobiDBLite consensus disorder prediction 215 269 - -
Aev01g3087 775 MobiDBLite consensus disorder prediction 632 673 - -
Aev01g3087 775 SUPERFAMILY TPR-like 492 588 IPR011990 GO:0005515
Aev01g3087 775 ProSiteProfiles TPR repeat profile. 117 150 IPR019734 GO:0005515
Aev01g3087 775 PANTHER - 1 771 - -
Aev01g3087 775 MobiDBLite consensus disorder prediction 379 441 - -
Aev01g3087 775 MobiDBLite consensus disorder prediction 206 273 - -
Aev01g3087 775 MobiDBLite consensus disorder prediction 1 31 - -
Aev01g3087 775 CDD PB1 289 358 - -
Aev01g3087 775 Pfam PB1 domain 288 377 IPR000270 GO:0005515
Aev01g3087 775 ProSiteProfiles TPR repeat profile. 43 76 IPR019734 GO:0005515
Aev01g3087 775 SMART PB1_new 286 378 IPR000270 GO:0005515
Aev01g3087 775 ProSiteProfiles PB1 domain profile. 279 378 IPR000270 GO:0005515
Aev01g3087 775 Gene3D - 286 358 - -
Aev01g3087 775 MobiDBLite consensus disorder prediction 742 756 - -
Aev01g3087 775 SMART tpr_5 117 150 IPR019734 GO:0005515
Aev01g3087 775 SMART tpr_5 43 76 IPR019734 GO:0005515
Aev01g3087 775 SMART tpr_5 81 116 IPR019734 GO:0005515
Aev01g3087 775 Gene3D Tetratricopeptide repeat domain 40 171 IPR011990 GO:0005515
Aev01g3087 775 MobiDBLite consensus disorder prediction 741 775 - -
Aev01g3087 775 MobiDBLite consensus disorder prediction 11 31 - -
Aev01g3087 775 MobiDBLite consensus disorder prediction 632 660 - -
Aev01g3087 775 PANTHER PROTEIN CLMP1 1 771 IPR044517 -
Aev01g3087 775 MobiDBLite consensus disorder prediction 757 775 - -
Aev01g3087 775 SUPERFAMILY CAD & PB1 domains 285 356 - -
Aev01g3087 775 MobiDBLite consensus disorder prediction 418 441 - -
Aev01g3087 775 SUPERFAMILY TPR-like 41 174 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g3087 Aev-Chr1 32126542 32128869 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g3087 40 164 Calmodulin-binding Proteins AT3G25230 29.412 8.36e-10 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g3087 - - gmx:100786963 1225.31