Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g3085 ATGAGTCAACTCGGCGTCATACTGCAGGAATCGCTGCGCGCTGAAACAGAGGCAAGAACCATCCTCGGTCTCCTAACGGACCGAGTGGACGGTGGTGTGGACAGGGGCCAACGCCGAAGGCGAACTCTCAAGGAACGCCTCAGATTCACCGGAATGGGTTGCTGCGGCGCCACCTGGGTTTTCCGTCCGGTAGCCCTAACCTTCAGGCATGCTCAAGAACAAGCGCCTGAAACTGGTGGAGGGGGAACAACGCCACTGACTCAGCAGGAGCAGGAGCAGGAGCAAGACACAAATCCGGGTCAAGATCTGAACCCGTTTGGACTCGAATGTGTGCGCCCGAGTACTTCGGGCTCGGGAATGAATCTGGCGGCGGCGTTAGCGGCGGAGCGTCAATTGCGGGGGACGCAGGAGGCGGATGGGGGCGGAGGCGAGGAGGGATCAGGGACGCCGTGGAGGGTATCGCTAATGCGGCTGCTGGAGGAGACGGAGGGAGGTGGTGGTGATGCAGAGGGGAATGATTGGGTGTGCTGCGTGTGCATGGGGAGGAAGAAAGGAGCGGCGTTCATTCCATGTGGGCACACGTTCTGCAGGGTTTGCTCTCGGGAGGTGTGGTTGAATCGAGGTACCTGCCCTCTTTGCAATCGTTCCATCCTCGAGATTCTCGACATCTTCTGA 675 0.597 MSQLGVILQESLRAETEARTILGLLTDRVDGGVDRGQRRRRTLKERLRFTGMGCCGATWVFRPVALTFRHAQEQAPETGGGGTTPLTQQEQEQEQDTNPGQDLNPFGLECVRPSTSGSGMNLAAALAAERQLRGTQEADGGGGEEGSGTPWRVSLMRLLEETEGGGGDAEGNDWVCCVCMGRKKGAAFIPCGHTFCRVCSREVWLNRGTCPLCNRSILEILDIF* 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g3085 224 CDD RING-HC 176 213 - -
Aev01g3085 224 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 17 224 - -
Aev01g3085 224 PANTHER OS01G0917900 PROTEIN 17 224 - -
Aev01g3085 224 SUPERFAMILY RING/U-box 171 221 - -
Aev01g3085 224 MobiDBLite consensus disorder prediction 77 102 - -
Aev01g3085 224 ProSiteProfiles Zinc finger RING-type profile. 176 214 IPR001841 -
Aev01g3085 224 SMART ring_2 176 213 IPR001841 -
Aev01g3085 224 MobiDBLite consensus disorder prediction 73 106 - -
Aev01g3085 224 Pfam Zinc finger, C3HC4 type (RING finger) 175 218 - -
Aev01g3085 224 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 170 223 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g3085 Aev-Chr1 32117917 32118591 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g3085 38 224 C3H Transcription Factor Family AT4G22250 51.724 1.89e-55 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g3085 - - gmx:100792613 248.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g3085 01 32117917 32118591 Aev04g0140 04 888078 888782 PCT