Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g3073 ATGGCCACCTCACTCCTCTTGTTTGTTTCATTCTTCTTCTCACTGCATCACCTCACTGCCTATTCAACCCCACAATACAGTACTACTCCCCAATCTCTCTCAAACTACCTTCCTAAGAAACCACACCTCAACACCATAGACTCTTGCTGGCGTGCCAAGTCTGATTGGGCATCGAACCGCCGCGCCTTGGCTGACTGTGCTATTGGCTTTGGCAGCGATGCCATTGGAGGCAAGTATGGGTCCTTATATGTAGTCACTGATGCCTCTGATGACCCTGCAAACCCAAAACCAGGCACACTCCGCTATGCTGCAATCCGAACAGAGCCCCTCTGGATCATTTTTAGCAAGGACATGGTCATTGCCCTCGAGAATGAGCTCATTGTCAACAGCTACAAGACCATCGATGGCAGAGGAGCTAAGGTTGAGATTGCAAATGGGCCTTGCATTACCATTCAAGGCGTCAGCCATGTCATCATTCATGGAATTAGCATCCATGATTGCAAGCAGGGAAGCTCTGGCCTTGTGAGGAGTGCTCCTGACCATGTTGGCCATCGACAGGGCTCTGATGGTGATGCCATTAGCATATATTCTTCCTCCAATGTTTGGATCGACCATTGCTTCTTGGCTCGTTGCACCGACGGCCTAATCGATATCATTCATGCATCCACTGCCATTACCATTTCTAACAACTATTTCACCCAGCATGACAAAGTTATGCTGTTAGGACACAATGATCAATACACAGCAGATAAAGTCATGAAGGTAACAATAGCCTTCAACCGGTTTGCTAGTGGCTTAACTGAAAGGATGCCAAGGGTAAGATTTGGTTATGCTCATGTGGTCAACAACAGATATGATGAGTGGAAAATGTATGCTATAGGTGGCAGTTCCAACCCAACCATTTTAAGTGAAAGGAACTTCTATACAGCACCAAATGATGCAAATGCTAAACAGGTTACAAAGAGGGAAGCGAAGGGAAAGTGGAAGAGTTGGAAATGGAGATCTTCTAATGATGTATTCACAAATGGTGCTTATTTTGTACCATCTGGTTATGGAAGTTGTGCCCCAAATTATTCACCTGCTCAATCTTTCACTGCTGTTCCGGCATACATGGTGCCTGTAATAACTCTCAATGCAGGTCCCTTGAGTTGTGTTGTTGGGAGGGCCTGTTAA 1173 0.4604 MATSLLLFVSFFFSLHHLTAYSTPQYSTTPQSLSNYLPKKPHLNTIDSCWRAKSDWASNRRALADCAIGFGSDAIGGKYGSLYVVTDASDDPANPKPGTLRYAAIRTEPLWIIFSKDMVIALENELIVNSYKTIDGRGAKVEIANGPCITIQGVSHVIIHGISIHDCKQGSSGLVRSAPDHVGHRQGSDGDAISIYSSSNVWIDHCFLARCTDGLIDIIHASTAITISNNYFTQHDKVMLLGHNDQYTADKVMKVTIAFNRFASGLTERMPRVRFGYAHVVNNRYDEWKMYAIGGSSNPTILSERNFYTAPNDANAKQVTKREAKGKWKSWKWRSSNDVFTNGAYFVPSGYGSCAPNYSPAQSFTAVPAYMVPVITLNAGPLSCVVGRAC* 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g3073 390 SUPERFAMILY Pectin lyase-like 64 389 IPR011050 -
Aev01g3073 390 PANTHER PECTATE LYASE 18-RELATED 17 389 IPR045032 GO:0030570
Aev01g3073 390 PRINTS Pollen allergen Amb family signature 89 114 IPR018082 -
Aev01g3073 390 PRINTS Pollen allergen Amb family signature 269 288 IPR018082 -
Aev01g3073 390 PRINTS Pollen allergen Amb family signature 331 355 IPR018082 -
Aev01g3073 390 PRINTS Pollen allergen Amb family signature 66 83 IPR018082 -
Aev01g3073 390 PRINTS Pollen allergen Amb family signature 361 384 IPR018082 -
Aev01g3073 390 PRINTS Pollen allergen Amb family signature 189 210 IPR018082 -
Aev01g3073 390 PRINTS Pollen allergen Amb family signature 291 310 IPR018082 -
Aev01g3073 390 PRINTS Pollen allergen Amb family signature 125 141 IPR018082 -
Aev01g3073 390 SMART amb_all 117 314 IPR002022 -
Aev01g3073 390 Pfam Pectate lyase 126 308 IPR002022 -
Aev01g3073 390 Gene3D - 43 383 IPR012334 -
Aev01g3073 390 PANTHER PECTATE LYASE 17 389 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g3073 Aev-Chr1 32033634 32035129 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g3073 1 384 Polysaccharide Lyase AT4G22080 65.544 0.0 541
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g3073 K01728 - gmx:100807483 626.706