LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aev01g3071	ATGACGCTTTACACCCATCCCGGGAAGAACCTCAACATCAGCGAGGGTGGTGGTGATGATCCCATGGGCAGCAGCTCCTCGCCGTCTGATCAAAATAATAATGAGAAGAAGGGAGCTGTCGTTGTAGTGGACTTCTTCGCTCATGATAAAACCAAGCAGCTACCATCATCATCATCATCAGCTCCACTACTATTTGATGATCCTCCTCCTCATCTCAACGTTAATCTTGGCTTGAATCTTATTGCTACACTCGGATGTGGTGGTGATGGAGCTACGGTCAATGCTGAACATCTGCTGTCAGATAATGGGAAACATAAGCAAGCAACCACTGTCGATGATGGGCAAGAAGTTGTTAAACGCATGAAAGTGGAGAAGCAAGAGTTGCAGGCAAAGCTTAGGGAATGGAAGAGCAAGTACGAGAATTTGGAAATGCAATGTGAGGCTTATGCTTGGCAACAGCGACAGAAACAACACGCCCCCCTGCAGCTAAAAGGTGCCGAAATGGTGGTAACAAAGTCCTTTGCTCCTAATAATTTGGCCACAACGGATGATCAACCCACTGCCACTACCACTAACACCAGCCCACCTTGTCGCGTCGCAGTCCGTACCCTCCCAGAAGGCCCCGCGATGGTTGATGGGTTTTATTGGCGAAAATATGGTCAAAAAATGGAAAAGGGAAAGCCTCATCCTCGAGCATATTACAAATGCACCATGCAAGCTGGGTGCCCAGTTCGCAAACAAGTTCAGCGTAGTTGGGAGGTTGATAAAGAAATATTGATAACAACATATGAAGGAGAGCATAACCATGCAGTGGCAGGAGAGGCGATGGCGATGGTATCGACGACGACATCTGCAGTAAGGATGTTTATGACAGGGGCAATGTCAAGTAGTGATGGTAAGGTAATGATGATGAACCCCAATTGGCTAGCGGGACCCATCAATCCAACTTCAAACCTAGTGCCAATTAAACTCTCCGCCATGAAGCCATTCCCAACCGTCTCATTGGACCTCACAGGCACAGCCAACTCCTACCCCTACCCCTACCACCTCCATAACAAATCCCAATTCTCTGGCCTTCACTTGTCTCCTCATCATCACCACGCCGCGGGCTCCTCCTCTCAACCTCCTCCAGCCCAACAACAGCTCTCCTTCCACGACGTCACTGCTGCTGCCGCCGCCATCATCAACTCCGACCCCAACTTCTCCGCAATGATTGCCGCCGCCGTTTCCTCCATCACGAGCGCAGCTCAGCCAAACAACAACAACAACAACAGTAGTCAACAATGA	1287	0.4949	MTLYTHPGKNLNISEGGGDDPMGSSSSPSDQNNNEKKGAVVVVDFFAHDKTKQLPSSSSSAPLLFDDPPPHLNVNLGLNLIATLGCGGDGATVNAEHLLSDNGKHKQATTVDDGQEVVKRMKVEKQELQAKLREWKSKYENLEMQCEAYAWQQRQKQHAPLQLKGAEMVVTKSFAPNNLATTDDQPTATTTNTSPPCRVAVRTLPEGPAMVDGFYWRKYGQKMEKGKPHPRAYYKCTMQAGCPVRKQVQRSWEVDKEILITTYEGEHNHAVAGEAMAMVSTTTSAVRMFMTGAMSSSDGKVMMMNPNWLAGPINPTSNLVPIKLSAMKPFPTVSLDLTGTANSYPYPYHLHNKSQFSGLHLSPHHHHAAGSSSQPPPAQQQLSFHDVTAAAAAIINSDPNFSAMIAAAVSSITSAAQPNNNNNNSSQQ*	429

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aev01g3071	428	PANTHER	WRKY TRANSCRIPTION FACTOR 6	26	159	-	-
	Aev01g3071	428	SUPERFAMILY	WRKY DNA-binding domain	206	270	IPR036576	GO:0003700\|GO:0006355\|GO:0043565
	Aev01g3071	428	MobiDBLite	consensus disorder prediction	177	196	-	-
	Aev01g3071	428	ProSiteProfiles	WRKY domain profile.	205	272	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Aev01g3071	428	PANTHER	WRKY TRANSCRIPTION FACTOR 36-RELATED	26	159	IPR044810	GO:0003700
	Aev01g3071	428	PANTHER	WRKY TRANSCRIPTION FACTOR 36-RELATED	189	426	IPR044810	GO:0003700
	Aev01g3071	428	MobiDBLite	consensus disorder prediction	357	383	-	-
	Aev01g3071	428	Pfam	WRKY DNA -binding domain	212	269	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Aev01g3071	428	PANTHER	WRKY TRANSCRIPTION FACTOR 6	189	426	-	-
	Aev01g3071	428	MobiDBLite	consensus disorder prediction	19	34	-	-
	Aev01g3071	428	Gene3D	WRKY domain	196	272	IPR036576	GO:0003700\|GO:0006355\|GO:0043565
	Aev01g3071	428	SMART	WRKY_cls	210	271	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Aev01g3071	428	MobiDBLite	consensus disorder prediction	367	383	-	-
	Aev01g3071	428	Coils	Coil	111	152	-	-
	Aev01g3071	428	MobiDBLite	consensus disorder prediction	1	34	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Aev01g3071	Aev-Chr1	32029376	32031391	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Aev01g3071	198	412	WRKY Transcription Factor Family	AT4G04450	44.490	2.55e-47	166

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	WRKY	Aev01g3071		WRKY	1.4e-23	CL0274

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aev01g3071	-		-	sspl:121744815	211.46