Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g3048 ATGGGGTGTAACGGTAGCAAGCAGAAGAAACAAAGGCAAGAACTTTTTGGTCATGGATCATCAAACGACACTGGCTCTTCTGTTGAAACCCATCAAAGGTACAACACTGTTCAGCCACCTTCTGCTGCGCATGTTCATTCATCAGCACCCAAGCCACAGTCACAGGCTCCAATCGGGACCCAACCAAAACCATCTCCTCCTCAGAATGTGAGGGCAGAGAAAAAGGCTGATCCAACCACCATTCTGGGAAAACCCTTTGAAGATATCAAGAAGTACTATACTTTGGGAAAAGAATTGGGCAGAGGGCAATTTGGGATTACTTATCTCTGCACTGAGAATTCCAGTGGGCAGAGTTATGCGTGCAAATCCATCTTGAAGAGGAAGCTCGTGTCCAAAGCTGACAGGGAAGATATGAAGAGGGAGATTCAGATCATGCAGCATTTGTCTGGGCAACCCAACATTGTGGAATTCAAGGGTGCTTTTGAGGACAGGTACTCGGTGCACCTTGTCATGGAACTCTGTGCTGGCGGGGAGCTATTCGATCGAATCATTGCGGAGGGTCACTATTCTGAGAGAGCAGCTGCATCAATTTGCAGAGCCGCTGTGAATGTTGTGCACATTTGCCACTTTATGGGGGTAATGCACAGGGATCTGAAGCCTGAGAATTTCTTGCTTTCGAGCAAGGATGAAGGAGCAACTCTCAAAGCAACTGATTTTGGACTCTCTGTCTTCATCGAAGAAGGGAAGGTTTACCGTGATATGGTGGGCAGTGCTTACTATGTTGCTCCTGAGGTATTGCGCCGTAGTTATGGCAAGGAAATAGATATTTGGAGTGCTGGCATCATATTGTATATTCTCCTGAGTGGAGTTCCACCTTTTTGGGATGAAACTGAAAAGGGAATATTCAATGCCATATTGGAAGGTGAGATTGACTTTGTAAGTGATCCATGGCCATCAATATCAGACAGTGCTAAAGATCTAGTCAGGAAGATGTTGACACAGGATCCAAAGAAGCGTATCACTTCTGCTCAAGTCCTTGAACACCCTTGGATGAGAGAAGGTGGAGAGGCATCTGATAAACCAATTGATAGTGCAGTTCTGTCTAGAATGAAACAATTCAGGGCAATGAATAAGCTCAAGAAGCTTGCATTGAAGGTGATTGCTGAAACTCTGTCAGAAGAAGAGATTAAAGGTCTCAAAGCAATGTTTGCAAATATGGACACCGACAACAGTGGCACCATCACCTATGAAGAACTGAAGACAGGCTTGGCTCGAATTGGATCGCGACTGTCAGAGTCTGAAGTGAAGCAACTCATGGAAGCTGCTGATGTTGACGGGAATGGGTCAATTGACTATATTGAATTCATCTCAGCTACAATGCATAGGCACAGACTTGAACGGGATGAACACCTTTACAAAGCATTCCAGTATTTTGATAAGGATAACAGTGGGTATATTACTAGAGATGAATTGGAGAGTGCCATGACTCAGCATGGAATGGGTGATGAAGCAACAATAAAAGAAATAATATCTGAGGTGGATGCAGATAATGACGGGAGAATAAACTATGAGGAGTTCTGTGCAATGATGAGAAGTGGAATGCCACAACAGGGACAACCACTGCTCTAA 1629 0.4463 MGCNGSKQKKQRQELFGHGSSNDTGSSVETHQRYNTVQPPSAAHVHSSAPKPQSQAPIGTQPKPSPPQNVRAEKKADPTTILGKPFEDIKKYYTLGKELGRGQFGITYLCTENSSGQSYACKSILKRKLVSKADREDMKREIQIMQHLSGQPNIVEFKGAFEDRYSVHLVMELCAGGELFDRIIAEGHYSERAAASICRAAVNVVHICHFMGVMHRDLKPENFLLSSKDEGATLKATDFGLSVFIEEGKVYRDMVGSAYYVAPEVLRRSYGKEIDIWSAGIILYILLSGVPPFWDETEKGIFNAILEGEIDFVSDPWPSISDSAKDLVRKMLTQDPKKRITSAQVLEHPWMREGGEASDKPIDSAVLSRMKQFRAMNKLKKLALKVIAETLSEEEIKGLKAMFANMDTDNSGTITYEELKTGLARIGSRLSESEVKQLMEAADVDGNGSIDYIEFISATMHRHRLERDEHLYKAFQYFDKDNSGYITRDELESAMTQHGMGDEATIKEIISEVDADNDGRINYEEFCAMMRSGMPQQGQPLL* 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g3048 542 ProSiteProfiles EF-hand calcium-binding domain profile. 394 429 IPR002048 GO:0005509
Aev01g3048 542 Gene3D - 359 533 - -
Aev01g3048 542 ProSiteProfiles EF-hand calcium-binding domain profile. 466 501 IPR002048 GO:0005509
Aev01g3048 542 PANTHER SERINE/THREONINE-PROTEIN KINASE 45 535 - -
Aev01g3048 542 ProSitePatterns EF-hand calcium-binding domain. 407 419 IPR018247 -
Aev01g3048 542 SUPERFAMILY Protein kinase-like (PK-like) 76 372 IPR011009 -
Aev01g3048 542 MobiDBLite consensus disorder prediction 17 56 - -
Aev01g3048 542 ProSitePatterns EF-hand calcium-binding domain. 479 491 IPR018247 -
Aev01g3048 542 SUPERFAMILY EF-hand 391 530 IPR011992 -
Aev01g3048 542 CDD EFh_PI-PLC 399 532 - -
Aev01g3048 542 Pfam EF-hand domain pair 469 531 IPR002048 GO:0005509
Aev01g3048 542 Pfam EF-hand domain pair 399 459 IPR002048 GO:0005509
Aev01g3048 542 Gene3D Transferase(Phosphotransferase) domain 1 179 358 - -
Aev01g3048 542 ProSiteProfiles Protein kinase domain profile. 93 351 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev01g3048 542 Pfam Protein kinase domain 93 351 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev01g3048 542 SMART serkin_6 93 351 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev01g3048 542 ProSitePatterns Serine/Threonine protein kinases active-site signature. 213 225 IPR008271 GO:0004672|GO:0006468
Aev01g3048 542 ProSitePatterns EF-hand calcium-binding domain. 443 455 IPR018247 -
Aev01g3048 542 ProSiteProfiles EF-hand calcium-binding domain profile. 502 536 IPR002048 GO:0005509
Aev01g3048 542 SMART efh_1 398 426 IPR002048 GO:0005509
Aev01g3048 542 SMART efh_1 470 498 IPR002048 GO:0005509
Aev01g3048 542 SMART efh_1 434 462 IPR002048 GO:0005509
Aev01g3048 542 SMART efh_1 505 533 IPR002048 GO:0005509
Aev01g3048 542 ProSitePatterns EF-hand calcium-binding domain. 514 526 IPR018247 -
Aev01g3048 542 CDD EFh 473 531 IPR002048 GO:0005509
Aev01g3048 542 PANTHER CALCIUM-DEPENDENT PROTEIN KINASE 21-RELATED 45 535 - -
Aev01g3048 542 MobiDBLite consensus disorder prediction 1 81 - -
Aev01g3048 542 Gene3D Phosphorylase Kinase; domain 1 95 178 - -
Aev01g3048 542 ProSiteProfiles EF-hand calcium-binding domain profile. 430 465 IPR002048 GO:0005509
Aev01g3048 542 CDD STKc_CAMK 93 350 - -
Aev01g3048 542 ProSitePatterns Protein kinases ATP-binding region signature. 99 126 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g3048 Aev-Chr1 31899441 31902148 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g3048 1 542 EF-hand Containing Proteins AT4G04720 75.735 0.0 837
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Aev01g3048 Pkinase 7.8e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g3048 K13412 - gmx:100812843 909.827