Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g3028 ATGGCAACCTCGTCAACTGTAGATCAGTATGATGAATCCATGAAGAAACAAGTGGCATCTCTTCTGCGGGTTATGTGTTTGGTTAAATCCTTCAAAGAAGATAATACTCCTTGCAAAATTGACGAGGGACTCTTTTTGGGTTCAGTTGGCACTGCAACTAACAAGGATGCCTTGAAAAGCTTGAATATTACCCACATTTTGACCGTTGCCGGCAAACTGCCACCTGCACATCCTGGGGATTTCATATACAAAACTATACAAGTTATTGACAAAGAAGATGTCAACATAAAACAATACTTTGATGAGTGTTTTGATTTTATTGATGAAGCCAAAAGGCATGGAAGAGGAGGTGTTTTGGTTCATTGTTTTGCTGGAAAATCAAGGAGTGTGACTGTTGTTGTTGCATATTTGATGAAGACTCGCAGAATGAGCTTTTCTGAAGCTCTGGAACATGTAAAGAGCATACGACCAATGGCAGCTCCGAATCCTGGTTTCATTCGTCAGCTGGAAGACTTTGAAAACTCACTTCAAGGTTTATGGGTCCGGAACCACATCTAG 558 0.4086 MATSSTVDQYDESMKKQVASLLRVMCLVKSFKEDNTPCKIDEGLFLGSVGTATNKDALKSLNITHILTVAGKLPPAHPGDFIYKTIQVIDKEDVNIKQYFDECFDFIDEAKRHGRGGVLVHCFAGKSRSVTVVVAYLMKTRRMSFSEALEHVKSIRPMAAPNPGFIRQLEDFENSLQGLWVRNHI* 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g3028 185 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 35 177 IPR029021 -
Aev01g3028 185 CDD DSP 37 171 - -
Aev01g3028 185 SMART dsp_5 36 175 IPR020422 GO:0006470|GO:0008138
Aev01g3028 185 Gene3D Protein tyrosine phosphatase superfamily 29 180 IPR029021 -
Aev01g3028 185 Pfam Dual specificity phosphatase, catalytic domain 44 174 IPR000340 GO:0008138|GO:0016311
Aev01g3028 185 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 97 157 IPR000387 GO:0016311|GO:0016791
Aev01g3028 185 PANTHER BNAA01G23680D PROTEIN 5 178 - -
Aev01g3028 185 ProSiteProfiles Dual specificity protein phosphatase domain profile. 36 178 IPR020422 GO:0006470|GO:0008138
Aev01g3028 185 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE 5 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g3028 Aev-Chr1 31798526 31805040 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g3028 39 178 Protein tyrosine phosphatase (PTP) family AT3G06110 60.714 1.14e-58 179
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g3028 - - lang:109352945 283.108
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g3028 01 31798526 31805040 Aev01g3028 01 31798526 31805040 ECH