Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g3026 ATGGGAAATTCTCCGAGTAACAGTAACAGAAGAAGAAGAAGCATTTACTCACATCCACATCTGCCACCACCACATTACTATTACTCTTCTTCTGCAGAGCCTCATCCACCGCCGCAAGGTTACTTTTCCACCGGTGGCTATGTGGGCCCACCACCACCTCCTCCTCATCCTCATCCTCAGACCCATTCCTTCTATTACTCAAATGGGTACGCAAACTCCAACATCAACGCTCCCATGGTGGGTCGCCTTCACTACCACCCTTTCTATGCAAATCAGGGTGCTTCTGCTTCTTCTATGTGGAACCCTGTTTCTACTGTTAGTGTTTGCCCACAAGGCCAAGCTGGTCCTGCCGCCGCAACGCCACCGCCCTGTGTTGAGCACCAAACCACCAAGAAGATAAGGAATGACGTCAACTTGCACAAGGATACTCTGCGCCTTGAGGTTGATGAGCATAACCCTGATCACCACTTGGTTTCTTTCGTTTTCGATGCCCTCTTCGACGGCAGCATTACTATCTTCTACCTGGCCAAAGAAGAAGAAAAATGTAGATTTGTTCCACTATTTCCCGAAGCGTTTGAGCCAATCACATTCCCCTTTCAGAAAGGTGTTGGCCAGAAATTCCGTCAGCCTTCAGGAACAGGCATTGACCTTGGTTTCTTCGAGTTGGATGACCTTTCAAAGCCCTCACCTACAGAAGACATATTCCCCCTTGTAATATGTGCTGAGACAAGTTTGAGAACTCCTTCAGCAGATGAAACTCCCGGTGGTTCCATGATAGGTGCACACCCTCACATGCAAATAACTCAGGCTGTATTGGAGAAAAGCAATGGCAGTGGTGCTTTCCAGGTGAAAGTAGTTAGGCAGATTCTGTGGATCGATGAAGTTCGTTATGAGTTGAGAGAGTTGTACGGAATAGGAGGCTCAACAGAAGAAGATTTTGATGATAATGATCCTGGCAAGGAGTGTGTAATATGCATGACTGAACCAAAGGACACTGCTGTCTTACCTTGCCGACATATGTGCATGTGCAACGAGTGTGCCCAAGCATTGCGGTTTCAATCAAACAAATGCCCTATATGCCGCCAACCTATTGAGGAACTTATAGAGATCAAGATAAACAACGGTGACCAATAA 1134 0.47 MGNSPSNSNRRRRSIYSHPHLPPPHYYYSSSAEPHPPPQGYFSTGGYVGPPPPPPHPHPQTHSFYYSNGYANSNINAPMVGRLHYHPFYANQGASASSMWNPVSTVSVCPQGQAGPAAATPPPCVEHQTTKKIRNDVNLHKDTLRLEVDEHNPDHHLVSFVFDALFDGSITIFYLAKEEEKCRFVPLFPEAFEPITFPFQKGVGQKFRQPSGTGIDLGFFELDDLSKPSPTEDIFPLVICAETSLRTPSADETPGGSMIGAHPHMQITQAVLEKSNGSGAFQVKVVRQILWIDEVRYELRELYGIGGSTEEDFDDNDPGKECVICMTEPKDTAVLPCRHMCMCNECAQALRFQSNKCPICRQPIEELIEIKINNGDQ* 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g3026 377 PANTHER MAHOGUNIN 1 376 IPR045194 GO:0061630
Aev01g3026 377 CDD mRING-HC-C3HC5_MGRN1_like---blasttree 321 361 IPR045195 -
Aev01g3026 377 ProSiteProfiles Zinc finger RING-type profile. 322 361 IPR001841 -
Aev01g3026 377 PANTHER AMINOACYLTRANSFERASE, E1 UBIQUITIN-ACTIVATING ENZYME-RELATED 1 376 - -
Aev01g3026 377 SMART ring_2 322 360 IPR001841 -
Aev01g3026 377 SUPERFAMILY RING/U-box 321 367 - -
Aev01g3026 377 Pfam Zinc finger, C3HC4 type (RING finger) 320 366 - -
Aev01g3026 377 MobiDBLite consensus disorder prediction 1 61 - -
Aev01g3026 377 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 306 371 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g3026 Aev-Chr1 31777073 31779285 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g3026 75 377 C3H Transcription Factor Family AT3G06140 56.209 1.48e-108 321
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g3026 - - adu:107465273 530.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g3026 01 31777073 31779285 Aev01g3026 01 31777073 31779285 ECH