Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g3016 ATGTCAGGCCCAGAATGCTGCTCGAACCCACCGACCCTGAACCCCAGTGCTGGAGCTGGCCATGTCGACAAACTCGCTGGTCTCAATGCCTATCTTGCTGGCTCCCCTACCTCCAACCTCGCTGTTCTTCTTGTCTCCGACATTTTTGGATATGAAGCGCCGAATTTAAGGAACCTTGCAGACAAGGTTGCAGCTGCTGGGTACTATGTGGTTGTTCCAGACTACTTCAATGGTGATCCCTATGATTTCGACAATCCTAGCAGGCTGCCTTTAGACGTTTGGTTGAAAGATCATGGAACCGACCAAGGATTTGAAGTTACAAAACCCATAATTGATAGTTTAAAAAGTAAAGGTGTTTCTGCTATCGGGGCTGCTGGATTTTGTTGGGGTGCTAAGGTAGTGGTTGAGCTTTCGAAATGCAAACTTATTCAGAGTGCTGTGCTATTACATCCGTCATTTGTCTCTGTGGAGGACATCAAGGGTGTTGATGTTCCAACTTGTATACTTGGAGCTGAGTTTGACAAAATGTCTCCTCCAGAGCTTCTAAAGCAGTTTGAACAAGTCCTAGCTGCTAAACCCGGGGTTGATAGTTATGTGAAGATATTTCCAAAAGTGTCACATGGGTGGAGTCTGAGGTACAGCAAGGATGATGCAGAAGCTGTGAGGGCTGCTGAGGAGGCCCATCAGGATATGCTGGGATGCACTCTCCTCATTCCCTTTCTCTCTCTCTCTCTGTCTGTTCGAGTTTCTGCGGCTGCCGCACACCCACCTCTGCGAGGCTTCTCTCTTTCGATTATGGTGAGGGTTAGTGTGTTGAACGATGCTCTGAAGAGCATGTACAATGCTGAGAAGAGGGGGAAGCGCCAGGTCATGATTAGGCCTTCTTCCAAAGTCATTATCAAGTTCCTCTTGGTCATGCAGAAGCACGGATACATTGGAGAGTTTGAGTATGTTGATGACCACAGGTCTGGCAAGATCGTCGTTGAATTGAACGGTAGGCTGAACAAGTGTGGTGTTATCAGTCCCCGTTTTGACGTCGGTGTCAAGGAGATTGAAGGTTGGACTGCTAGGCTTCTTCCCTCAAGACAGTTTGGGTATATTGTGTTGACAACCTCTGCTGGCATCATGGATCATGAAGAAGCAAGGAGAAAGAATGTTGGTGGTAAAGTCCTGGGGTTCTTCTACTAG 1188 0.4764 MSGPECCSNPPTLNPSAGAGHVDKLAGLNAYLAGSPTSNLAVLLVSDIFGYEAPNLRNLADKVAAAGYYVVVPDYFNGDPYDFDNPSRLPLDVWLKDHGTDQGFEVTKPIIDSLKSKGVSAIGAAGFCWGAKVVVELSKCKLIQSAVLLHPSFVSVEDIKGVDVPTCILGAEFDKMSPPELLKQFEQVLAAKPGVDSYVKIFPKVSHGWSLRYSKDDAEAVRAAEEAHQDMLGCTLLIPFLSLSLSVRVSAAAAHPPLRGFSLSIMVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRSGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY* 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g3016 395 Gene3D - 335 395 - -
Aev01g3016 395 Gene3D - 266 334 - -
Aev01g3016 395 SUPERFAMILY Ribosomal protein S8 269 395 IPR035987 GO:0003735|GO:0005840|GO:0006412
Aev01g3016 395 Pfam Dienelactone hydrolase family 29 232 IPR002925 GO:0016787
Aev01g3016 395 Gene3D alpha/beta hydrolase 24 235 IPR029058 -
Aev01g3016 395 Pfam Ribosomal protein S8 272 395 IPR000630 GO:0003735|GO:0005840|GO:0006412
Aev01g3016 395 ProSitePatterns Ribosomal protein S8 signature. 365 382 IPR000630 GO:0003735|GO:0005840|GO:0006412
Aev01g3016 395 SUPERFAMILY alpha/beta-Hydrolases 28 231 IPR029058 -
Aev01g3016 395 PANTHER DIENELACTONE HYDROLASE 1 232 - -
Aev01g3016 395 PANTHER ENDO-1,3-1,4-BETA-D-GLUCANASE-LIKE PROTEIN 1 232 - -
Aev01g3016 395 Hamap 30S ribosomal protein S8 [rpsH]. 267 395 IPR000630 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g3016 Aev-Chr1 31710857 31715508 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g3016 266 395 Cytoplasmic Ribosomal Protein Gene Family AT5G59850 98.462 7.06e-91 268
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g3016 - - gmx:100801591 371.703
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g3016 01 31710857 31715508 Aev01g3016 01 31710857 31715508 ECH
Aev01g3016 01 31710857 31715508 Aev04g0252 04 1557723 1558993 PCT