Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g2997 ATGTCCCACATTCAGGTGGCCACACCTTTGGTTCTCCCCACAGACTCATCTGGTTTGGCCACCATGGACACCAATGAACCTGCGACCTTCCCTCCCATGGGCAATGGTGGCTCTCACAACCAAGAAAAAGAGCAAACGGAAGAAAGCAAGAAAACTTTAAAATACAGGCTTCAAAGGAGACTACGTCTTGGGTTCTCCGATTCACTCGCAACATTAGACATGAGTTCGTTACGCGTCGAGGATGCTAATAGAGTACCTTTCCCAAGCAACACAAGGACTCCTCAAGAATCCCCAACCCCCTTTTCCGATCCAGAGGATAATCAGGCAGATTCAAATGCCAACAACAACTGGAATGTTTTTGTTAATTTTATCAAGAAAGGATCCCAGGTGCCCTTACAATCCTTCCAGCAGCCAATTATTTCGAAATTCAGAAGAAAATGCCACAGAGTCAGGGAAGACCAGATGATTCCATCACTCAATTCTCCATCTGGGAAGTCTAGTCTTGACCCCGACTTCTACCGCTTCAAGTCTTCCTGGAAAAATTTCACTCTCTCTGAGCTACAATCTGCAACCAATTATTTCAGCCACGAGAATTTGATTGGGGAGGGAGGCTATGCTGAGGTCTACAAAGGCAAATTGGAAGATGGGAATTATGTAGCGATCAAACGGTTAACAAGAGGGGACCAAGAAGAAATGACTGCAGATTTCTTATCTGAGCTTGGCATTATAGTGCACGTGGATCACCCCAATATCGCTAAAGTGATTGGATACGGTGTTGAAGGCGGAATGCATCTTGTTCTTCAGTTGTCTCCACATGGCAGCCTAGCATCCATACTTTATGGACCCAGAGAGAGATTGGATTGGAGCATGAGATATAAGATTGCTGTGGGGATTGCCAAGGGCCTTCTCTATCTGCACGAGGAATGTCCAAGAAGGATTATTCACAGAGATATCAAGTCTGCTAACATATTGCTCTCTGAGGATTTTGAGCCACAGATTGCTGATTTTGGGCTTGCCAAATGGTTACCTGACCAATGGACTCATCATACTGTCTCAAATTTTGAAGGCACATTCGGCTACCTTCCTCCAGAATTCTTCATGCATGGTATAGTTGACGAAAAGACTGATGTCTATGCTTATGGAGTGTTGTTATTGGAGCTCATTACAGGAAGACAAGCTTTGGATAGCTCACAGAAAAGTCTTGTGATGTGGGCAAAACCTCTGCTATCTACAAATAAAAACGAAGAGCTTATTGATCCATATTTAGCTAATGCGTATGATGAAGATCAGATGAACCATATAATCTTAACAGCTTCTTTGTGTATAGAACAATCCTCAGTTCGACCTCTGATGAAGCAGGTATTACAGCTAACACGAGGCGAAGAAGAGAGCTTGAAGCTGGTAAAAGAACTGCAGAAGCAGAAGTCAAAACTTCAAAGGACGTACTCCGAAGAGCTCTTATATGCAGAAGAGTATAACTCCACTAAGATTTTGAGTGACATGGATCGATATATGCAGACTATTCTGGATTCCTCTAACAGTAGCGAAGAAGATGAACTGAATCTAAACTAG 1572 0.4332 MSHIQVATPLVLPTDSSGLATMDTNEPATFPPMGNGGSHNQEKEQTEESKKTLKYRLQRRLRLGFSDSLATLDMSSLRVEDANRVPFPSNTRTPQESPTPFSDPEDNQADSNANNNWNVFVNFIKKGSQVPLQSFQQPIISKFRRKCHRVREDQMIPSLNSPSGKSSLDPDFYRFKSSWKNFTLSELQSATNYFSHENLIGEGGYAEVYKGKLEDGNYVAIKRLTRGDQEEMTADFLSELGIIVHVDHPNIAKVIGYGVEGGMHLVLQLSPHGSLASILYGPRERLDWSMRYKIAVGIAKGLLYLHEECPRRIIHRDIKSANILLSEDFEPQIADFGLAKWLPDQWTHHTVSNFEGTFGYLPPEFFMHGIVDEKTDVYAYGVLLLELITGRQALDSSQKSLVMWAKPLLSTNKNEELIDPYLANAYDEDQMNHIILTASLCIEQSSVRPLMKQVLQLTRGEEESLKLVKELQKQKSKLQRTYSEELLYAEEYNSTKILSDMDRYMQTILDSSNSSEEDELNLN* 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g2997 523 ProSiteProfiles Protein kinase domain profile. 194 493 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev01g2997 523 PANTHER OS08G0249100 PROTEIN 47 498 - -
Aev01g2997 523 Gene3D Transferase(Phosphotransferase) domain 1 271 485 - -
Aev01g2997 523 Gene3D Phosphorylase Kinase; domain 1 162 268 - -
Aev01g2997 523 Coils Coil 461 481 - -
Aev01g2997 523 Pfam Protein kinase domain 195 456 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev01g2997 523 MobiDBLite consensus disorder prediction 14 51 - -
Aev01g2997 523 PANTHER RECEPTOR-LIKE CYTOSOLIC SERINE/THREONINE-PROTEIN KINASE RBK2 ISOFORM X1 47 498 - -
Aev01g2997 523 SUPERFAMILY Protein kinase-like (PK-like) 174 456 IPR011009 -
Aev01g2997 523 SMART serkin_6 194 457 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev01g2997 523 MobiDBLite consensus disorder prediction 86 112 - -
Aev01g2997 523 ProSitePatterns Serine/Threonine protein kinases active-site signature. 313 325 IPR008271 GO:0004672|GO:0006468
Aev01g2997 523 ProSitePatterns Protein kinases ATP-binding region signature. 200 222 IPR017441 GO:0005524
Aev01g2997 523 MobiDBLite consensus disorder prediction 83 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g2997 Aev-Chr1 31597628 31600298 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g2997 165 462 Receptor kinase-like Gene Family AT1G53420 40.065 5.37e-68 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Aev01g2997 Pkinase 7.4e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g2997 - - lja:Lj6g3v1915960.1 631.328
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g2997 01 31597628 31600298 Aev01g2997 01 31597628 31600298 ECH
Aev01g2997 01 31597628 31600298 Aev06g0858 06 5828683 5833438 ECH
Aev01g2997 01 31597628 31600298 Aev06g1190 06 7925190 7927283 ECH
Aev01g2997 01 31597628 31600298 Aev02g0601 02 4692026 4696795 ECH