Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g2992 ATGCTGTTTTGCGCCAAAACTGGAATTACCAAATCCAATTGCGGTTATGGTTTCTTTCTGAATCATCTCTTTATATCTAATCCAATGGAACCTTTTGCTTCTTCTTCTTCTTCTTCCCTAATCCAAACTCGGTTGACCCAAAACCCTTCTTCTACTGCTTCAGTGTGGGACCTGAGCTACCTCATGGACTTCACCTTAGACGACGATGATCACGTCTCCATTCCCTTCGATCACAACAGCAGTTCCCAACCTCCGATCACAGATAACGTTCGAAAGCGGGACCCGCGGCTCACGTGCTCCAATTACCTGGCGGGTCGGGTCCCCTGCGCATGCCCGGAGGAAGACGAAGAGGCGTTTCCCGGTAAGAAGAAGCGGGTCCGGACGGTGGGCGCAGCGGGTGGCGTGGCGCGGTGTCAGGTGGAAGGGTGCGAGGCTGATATCGGTGGGCTGAAAGGGTACCATCGGAGGCACAGGGTGTGTCTGCGGTGTGCCAATGCTACTACCGTTATGCTTCATGGAGAACCCAAGAGATACTGCCAACAGTGTGGAAAGTTTCACGTATCATCAGATTTTGATGAAGGTAAACGTAGCTGTAGAAGAAAATTAGAACGCCATAATAATCGGAGGCGAAGAAAACCTGCAGAGTCAAGACCTGCTGCAGCTGATCATGATCTTCAACCTGTTATGCAGACTGAGGATTTCAGTTATGATGGTGAAGTGGGAAAAGATTGTACAGATTTGAGCAGTGACATAAATGAAAAAAGAGCTTCCATGGATCACGAAGATGGACAATTTAATACTTTTTGCTCAACTCCATACATACAGAATATTAATAATAACAGTGCTTTATCTTTTGTTGCTTCTGGTGAAACACGAGTGTATGGTGGAAAAGATGTTTCCAATTCACCATCATATTGCGACAAGAATGCTTATTCATCTATGTGCCAAACAGGTCGGGTCTCCTTTAAGCTTTATGATTGGAATCCTGCAGAGTTCCCTCGAAGGCTAAGACACCAAATATTCCAGTGGTTGGCGAGTATGCCCCTAGAGCTGGAGGGATACATCCGCCCTGGGTGTACAATCCTGACAATTTTTATTTCAATGCCAAAGTTTAGTTGGGCAAATTTGCATGAATATCCTATGCACTATGTGCGTGATCTTCTTGCTCCCGGAAAGACGCTATCTGGAAAAGGCAAAATACTAATTCATCTGAATGACATGGTCTTCCGTATTATGGAAGATGGATTTTCTGTGATGAAAGTTGAGGTAAACGTGCAGGCACCAAGGCTTCACTATGTTCATCCCACATGCTTTGAGGCTGGCAAACCTATGGAGTTTGTTGTTTGCGGAAGCAACTTGCTGCAACCTAAGTTTCGGCTCCTTGTTTCTTTTTCTGGAAAGTATCTGAAGTACGAGCATTGTCTTGCATCTACACATAACTGGACTGAAGACAGTACATCTTGTGCTTTGGACAATCAGTTATACAAGATACTTGTTCCTCATACAGAGCCAAATCTCTTTGGTCCTGCGTTTATTGAGGTGGAGAATGAATCAGGTTTATCAAATTTCATTCCTGTACTCATTGGCGACAAGGAAATTTGCTCCGAAATGAAGATATTGCAGCAAAAACTAGATATGCCTCTCCTTTCCAAACAATTCCAATCTGCATCTGCTGCTTCTGTGTGCAACTCATGTGAAGCTTTTGCACTTAGGCACACATCATCATCAGCAGACTTACTTTTAGATATAGCATGGTTGCTTAAGGATCCCACTTCACAAAAATTCGATAGATTGATTACGTCTTCACAAGTTAAGAGATATTGTTATCTGCTGAACTTTCTGATATGCAATGATTCAACAACCATTTTGGAGAAAATACTACCGAATTTGATGATCTTGACAGAAAGCACAAAAGCAAACAATGCAGTTAATAGGATAAGTGATGTTGACATGACTCCATTATTGAAATGCATGTGTAATGCTCGAGAAGCCCTTTATCAGAAAAGTGGAGCTGTTGGTGTGCACTCTGAAACCGAAGATTCTGAACTTGCTCGTAGTTACTCCCAAGACGACATGCCATCAGTTGTGTCAATAGAAGATGCCAAGTTGGAAGCACTGAGAAGTTCGATTCCTAGTGACAAAAATGAAACTATACCTCTATTGAATAGGGATATCATAATGAATGTAGAAGAAGTGCCTGTAAAATCCGGCCATCAATATCCTGCTCCTGCTCGTCAATTCTTGACGTCGCGGGTGGCTGTTTTTGTGATTGTTTTGGCTGCTGTTTGTCTTGGTGTATGTGGAGTCCTCCTTCATCCCGGGAGGGTGGGTAAGTTAGCAATATCCATTAAAAGCTGTGTGTTTAACTATTTTTAG 2376 0.4339 MLFCAKTGITKSNCGYGFFLNHLFISNPMEPFASSSSSSLIQTRLTQNPSSTASVWDLSYLMDFTLDDDDHVSIPFDHNSSSQPPITDNVRKRDPRLTCSNYLAGRVPCACPEEDEEAFPGKKKRVRTVGAAGGVARCQVEGCEADIGGLKGYHRRHRVCLRCANATTVMLHGEPKRYCQQCGKFHVSSDFDEGKRSCRRKLERHNNRRRRKPAESRPAAADHDLQPVMQTEDFSYDGEVGKDCTDLSSDINEKRASMDHEDGQFNTFCSTPYIQNINNNSALSFVASGETRVYGGKDVSNSPSYCDKNAYSSMCQTGRVSFKLYDWNPAEFPRRLRHQIFQWLASMPLELEGYIRPGCTILTIFISMPKFSWANLHEYPMHYVRDLLAPGKTLSGKGKILIHLNDMVFRIMEDGFSVMKVEVNVQAPRLHYVHPTCFEAGKPMEFVVCGSNLLQPKFRLLVSFSGKYLKYEHCLASTHNWTEDSTSCALDNQLYKILVPHTEPNLFGPAFIEVENESGLSNFIPVLIGDKEICSEMKILQQKLDMPLLSKQFQSASAASVCNSCEAFALRHTSSSADLLLDIAWLLKDPTSQKFDRLITSSQVKRYCYLLNFLICNDSTTILEKILPNLMILTESTKANNAVNRISDVDMTPLLKCMCNAREALYQKSGAVGVHSETEDSELARSYSQDDMPSVVSIEDAKLEALRSSIPSDKNETIPLLNRDIIMNVEEVPVKSGHQYPAPARQFLTSRVAVFVIVLAAVCLGVCGVLLHPGRVGKLAISIKSCVFNYF* 792
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g2992 791 SUPERFAMILY SBT domain 136 215 IPR036893 GO:0003677|GO:0005634
Aev01g2992 791 Gene3D - 133 199 IPR036893 GO:0003677|GO:0005634
Aev01g2992 791 ProSiteProfiles Zinc finger SBP-type profile. 135 212 IPR004333 GO:0003677
Aev01g2992 791 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 7 51 788 - -
Aev01g2992 791 Pfam SBP domain 138 212 IPR004333 GO:0003677
Aev01g2992 791 MobiDBLite consensus disorder prediction 202 227 - -
Aev01g2992 791 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 51 788 IPR044817 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g2992 Aev-Chr1 31559368 31562945 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g2992 45 784 SBP-box Gene Family AT5G18830 44.713 0.0 630
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Aev01g2992 SBP 4.9e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g2992 - - aprc:113863838 996.497