Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g2991 ATGGCGAGGTATCGAAGCCGGAGCAGAAGCTACAGCCCTCGGCGCCGGAGCAGAACCCCACCTCGCGGACGAAAGCGCCACGATGACGATCGCTATGGCGACAGCAGGTCCTACAGAGACCGCCGTTCCCCTGCACCTTCTGGCTTGCTCGTTCGTAATCTCCCCCTCGATGCAAGGCCTGAGGATCTCAGGGTTCCATTTGAGCGCTATGGTCCTGTGAAGGATGTTTACCTTCCTAAGAATTACTACACCGGTGAGCCTCGCGGATTTGGGTTCGTGAAGTATAGATATGGTGAAGATGCTGCTGAGGCAAAGCAACAGCTTAATCATACTATCATTGGTGGCCGTGAAATAAGAATTGTATATGCCGAGGAAAATCGGAAAACCCCTCACGAGATGCGTGTTATTTCTCGTGGAAGTGGTCGACATGGAGGTGGCAGAAGGAGGAATCGCTCAAGGTCTCCAAGACGCCGAAATCGTTCTTACTCTCGGTCTCCAACACCTGCTCGGGATGATTCGAGGGATCGGAGGGGCAGAGATGATTATTATTCTCCTGAGAAGTCAAGGTCAAGATCCAGATCAAGATCTTATTCTAGGTCCCGCTCTCCTAGTGGGGGGAAGGACTCTAGGAGGTCTCCACGTCCCAGGGAGAATGGTGGAAGTCCTAATGAGAGAAGGGATCGTACTCCCAGCAGATCGGGGAGTCCTAGGGGTAGTGATCGCAGCCCTTCTAGGTCTCGTTCGCGGTCTTACAGTCCACGCTGA 765 0.5346 MARYRSRSRSYSPRRRSRTPPRGRKRHDDDRYGDSRSYRDRRSPAPSGLLVRNLPLDARPEDLRVPFERYGPVKDVYLPKNYYTGEPRGFGFVKYRYGEDAAEAKQQLNHTIIGGREIRIVYAEENRKTPHEMRVISRGSGRHGGGRRRNRSRSPRRRNRSYSRSPTPARDDSRDRRGRDDYYSPEKSRSRSRSRSYSRSRSPSGGKDSRRSPRPRENGGSPNERRDRTPSRSGSPRGSDRSPSRSRSRSYSPR* 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g2991 254 MobiDBLite consensus disorder prediction 23 41 - -
Aev01g2991 254 PANTHER SERINE/ARGININE RICH SPLICING FACTOR 1 254 - -
Aev01g2991 254 SMART rrm1_1 48 121 IPR000504 GO:0003723
Aev01g2991 254 ProSitePatterns Protamine P1 signature. 2 12 IPR000221 GO:0000786|GO:0003677|GO:0005634|GO:0007283|GO:0035092
Aev01g2991 254 MobiDBLite consensus disorder prediction 141 160 - -
Aev01g2991 254 MobiDBLite consensus disorder prediction 204 234 - -
Aev01g2991 254 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 47 125 IPR000504 GO:0003723
Aev01g2991 254 SUPERFAMILY RNA-binding domain, RBD 44 154 IPR035979 GO:0003676
Aev01g2991 254 MobiDBLite consensus disorder prediction 164 193 - -
Aev01g2991 254 MobiDBLite consensus disorder prediction 235 254 - -
Aev01g2991 254 MobiDBLite consensus disorder prediction 1 51 - -
Aev01g2991 254 MobiDBLite consensus disorder prediction 128 254 - -
Aev01g2991 254 MobiDBLite consensus disorder prediction 1 22 - -
Aev01g2991 254 PANTHER SERINE/ARGININE-RICH SC35-LIKE SPLICING FACTOR SCL28 1 254 - -
Aev01g2991 254 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 49 119 IPR000504 GO:0003723
Aev01g2991 254 SMART rrm2_1 48 121 IPR003954 GO:0003676
Aev01g2991 254 Gene3D - 2 135 IPR012677 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g2991 Aev-Chr1 31556079 31558957 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g2991 51 109 Eukaryotic Initiation Factors Gene Family AT3G11400 44.068 1.08e-06 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g2991 K12900 - gmx:100788749 276.944