Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g2982 ATGAGAAACAACATCTCCGCAACAAGAAAGCGTGCTCGACAAATGGGTGACGAGAGCCTCAAGGTCGAACGTCAGAGAAGGTTGAAGATCTCTCACATGTTCACTCAACTTCAGGCCACTCTCCCCGCTCTCTTACCCAGGGCTACAAAGGAAGTGATTATAAACGAAACGATCAAGTACATTAAGGAACTTGAGACCAAGAAGAAAAACTTGGAGGACCTCAAGGAAACAATCAAACAAGCTCGATGTTGTAGTAGTACTAATAATACTAATTGCTCCGTCTCTGTCTCTGCCTCTAACACTGCGGCTTTCTTTGGCATTCAATCGGAGGCTCGCCCTGGTTTGATCACAACCATTTTCAAGGTGTTCAGCAACCATCATGCTGAAATTTTGGCTGCAAATGTCTCTGTTAATCAAGGGAATTTGATACTAGCTATCACTGCGCTCTTGCAAGATGCTGATGCAAATGGTACTCTAGATATGATTAAGAGAGAGATTATGATGAGTTTCTAG 513 0.4327 MRNNISATRKRARQMGDESLKVERQRRLKISHMFTQLQATLPALLPRATKEVIINETIKYIKELETKKKNLEDLKETIKQARCCSSTNNTNCSVSVSASNTAAFFGIQSEARPGLITTIFKVFSNHHAEILAANVSVNQGNLILAITALLQDADANGTLDMIKREIMMSF* 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g2982 170 Pfam Helix-loop-helix DNA-binding domain 21 65 IPR011598 GO:0046983
Aev01g2982 170 MobiDBLite consensus disorder prediction 1 20 - -
Aev01g2982 170 SMART finulus 20 70 IPR011598 GO:0046983
Aev01g2982 170 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 14 64 IPR011598 GO:0046983
Aev01g2982 170 Coils Coil 54 84 - -
Aev01g2982 170 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 21 80 IPR036638 GO:0046983
Aev01g2982 170 PANTHER HELIX LOOP HELIX DNA-BINDING DOMAIN PROTEIN 9 168 - -
Aev01g2982 170 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 9 168 - -
Aev01g2982 170 CDD bHLH_SF 23 65 - -
Aev01g2982 170 Gene3D - 5 93 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g2982 Aev-Chr1 31519138 31519790 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g2982 20 72 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G49770 43.396 8.30e-08 48.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Aev01g2982 HLH 1.3e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g2982 - - aprc:113874666 170.629