Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g2974 ATGGAACGGTGTTCCCTCCGGCGAAGGAGGGAGAAGGAGGTGGTGGTGGTGAGGGATGTAATATGGCCTGCGATTGAGGGGCATAACTGTCCAATATGTTTGAGGGATCTCGAACCTCGTTACAGAGAAGCTGCCGTTCTCGCACGGTGTAGCCACGCTTACTGCACCGACTGCATCCGGCGATGGAGTCACGTGCGAAGAACGTGCCCGCTCTGCAATTCGGAGTTCAACTCATGGTTCTGCAACCTCAGCCTTTCTTCCAGAAGCTTCCGCAAGCACTTCTTGCCCTCTTCTTGCTCTGAATCTCAATCTAGTTCTGATCCAAACCCAACACGCCTTCGCTCCAGCAGATTTGTTCGGAGAGGAAGGATTGCAGTTAGTAATGGGCGAAGGAGGGCATTGCCGTGGAGAAGATCGTTTGGGCATTCTGGGCTTGTGAGCCCTGATGTTATTGCTCAGAGGAAGCTTCAATGGCGTGCTAGCATATACAATCAAAGGATGCGACCTGATTGGACAACCCTAAGGTGTCTTGAGGTAGGATGCAAGGGCTGTGGTCCATGCAATTTATTCGTTTCCATGGGGACAAATCTCTTAGGGAACATATCAAGAAAAGATGCTCTAAAAAAAGAGATTCTACAACGGATTGAGCCATGGGTGATGAGGGAGCTAAAAGCTATCTTGGAAGACCCAGACCCAACTGTCATTGTTCATGTGGTAACCTCACAGTTCATTGCATGGCTGGAAGAGAAAGCTAGATCGCCCTCTGGGCTGCTTGATGTTCGAGATAGCTTCTTCATTGCGCCTCTTCGACCATTCCTGAATGATAAAGCCAGTATCTTTTGGCGTGAACTAAGAGTTGTCACAACATGGATACGTACGATGAAGTCGTTGATTATAAACATGAGGAGTGAGTGGAGAACAGAACAGAACAGAATTGAATTTACTTGCATTGCTCCTGCTCTTATTATTAGCATCTTCCCTCGGGTCGAGTCTCTGGTCTGA 1002 0.485 MERCSLRRRREKEVVVVRDVIWPAIEGHNCPICLRDLEPRYREAAVLARCSHAYCTDCIRRWSHVRRTCPLCNSEFNSWFCNLSLSSRSFRKHFLPSSCSESQSSSDPNPTRLRSSRFVRRGRIAVSNGRRRALPWRRSFGHSGLVSPDVIAQRKLQWRASIYNQRMRPDWTTLRCLEVGCKGCGPCNLFVSMGTNLLGNISRKDALKKEILQRIEPWVMRELKAILEDPDPTVIVHVVTSQFIAWLEEKARSPSGLLDVRDSFFIAPLRPFLNDKASIFWRELRVVTTWIRTMKSLIINMRSEWRTEQNRIEFTCIAPALIISIFPRVESLV* 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g2974 333 Pfam Ring finger domain 29 73 IPR001841 -
Aev01g2974 333 SUPERFAMILY RING/U-box 16 79 - -
Aev01g2974 333 PANTHER TOPOISOMERASE I-BINDING, ARGININE/SERINE-RICH A-RELATED 23 285 - -
Aev01g2974 333 ProSiteProfiles Zinc finger RING-type profile. 30 73 IPR001841 -
Aev01g2974 333 ProSitePatterns Zinc finger RING-type signature. 50 59 IPR017907 -
Aev01g2974 333 PANTHER E3 UBIQUITIN-PROTEIN LIGASE TOPORS 23 285 - -
Aev01g2974 333 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 25 89 IPR013083 -
Aev01g2974 333 SMART ring_2 30 72 IPR001841 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g2974 20 284 C3H Transcription Factor Family AT2G39100 42.910 2.09e-61 196
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g2974 - - adu:107464375 377.867
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g2974 01 31481181 31482807 Aev01g2974 01 31481181 31482807 ECH