Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g2973 ATGATGCGGGGATCTCATCGCAATCCCCTGTTCTTTTACCTCACTCTCATAGCAAGAACCACCTCACCACTTTTTCCAAGGGCGCATTTCCCTCCATCATCTTCACCATTCTGTGCTCTCGATTACTGCACATCCACAAAACCCTCAAAAGAACTATCCTTTACGGTGAACTACCTCATAAAAAATTGTGGGTTCCTCCCAGATTCCGCATTACACGTTTCAAAATACGTCCTTTTTGAGAAACCAGAGAAACCCGACTCAGTCCTCGCACTGTTCAGGAGCTTGGGCTTCTCAGATTCCCAGTTGCATCTCATCGTTCGAAGATTCCCTAGGGTTCTCCTCTGCAGCCCCAGAAAGACCCTCTTGCCGAAGCTCCAATTCCTCATCTCAAAAGGCGCTTCAACCCCCGTGCTTTCCAGAATCATAACCCTCAACCCCGTAATCTTGCAGAGAAGCTTGAAAAATCAGCTAATCCCTACTTTCGATTTGCTTAACAATTTCATTCAATCTGATGAAAAAACCATCATCTCCGTGAAACGTGCTGTCAGTGTCCTCTCTTGCCGCGCCGTCCACACAAATATCGCATTCTTGGTTGATGCTGGTGTGAGTGAGATAACCATGGCAAGGCTACTTCGGCATTGGCCTATGTTAGTTGTGCTACCTTGTGATTTCCTCAAAAGTATGGCAGAGGAAGTCATGGGTATGGGAATTCATCCTTCAAAAGCAAGTTTTGTTACTGCGTTGTACGCAAGAACGTTGCCAAAGTCCATGTGGGATAAGAAGGTTGAGTTGTATAAGAGGTTGGGTTGGACAGATGATGTGATTCGTGAAGCATTTGTGAGGCACCCATTCTGCATGCTCTTTTCTGAGAAGAAAATTGAGGCATGTTTCGGATTCTTGGTCAACCAACTAGGTTGGGATCCTCTTGATATTGCCGGTTATCCGTTGCTTCTTTCGATGAGATTGGAGAAAAGGATTGTTCCGAGGGCTTCTGTATTGGAATCTCTTGTGTCCAAAGGTTTGGCTAAGAGTACTAAACTGATGGGTGCGTATACTGTCACTGAAGAAATGTTCCTTAAGAGGTACGTGACTTGTTTTAAGGATGATGCTCCTCAGTTGTTGAAGCTGTATCAGGAAAAAATGAATCTCGACTAG 1155 0.4502 MMRGSHRNPLFFYLTLIARTTSPLFPRAHFPPSSSPFCALDYCTSTKPSKELSFTVNYLIKNCGFLPDSALHVSKYVLFEKPEKPDSVLALFRSLGFSDSQLHLIVRRFPRVLLCSPRKTLLPKLQFLISKGASTPVLSRIITLNPVILQRSLKNQLIPTFDLLNNFIQSDEKTIISVKRAVSVLSCRAVHTNIAFLVDAGVSEITMARLLRHWPMLVVLPCDFLKSMAEEVMGMGIHPSKASFVTALYARTLPKSMWDKKVELYKRLGWTDDVIREAFVRHPFCMLFSEKKIEACFGFLVNQLGWDPLDIAGYPLLLSMRLEKRIVPRASVLESLVSKGLAKSTKLMGAYTVTEEMFLKRYVTCFKDDAPQLLKLYQEKMNLD* 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g2973 384 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN, PUTATIVE ISOFORM 1-RELATED 39 382 - -
Aev01g2973 384 PANTHER CGI-12 PROTEIN-RELATED 39 382 IPR003690 GO:0003690|GO:0006355
Aev01g2973 384 Pfam mTERF 191 358 IPR003690 GO:0003690|GO:0006355
Aev01g2973 384 Pfam mTERF 89 300 IPR003690 GO:0003690|GO:0006355
Aev01g2973 384 Gene3D Transcription termination factor 3, mitochondrial 178 369 IPR038538 -
Aev01g2973 384 SMART mt_12 308 342 IPR003690 GO:0003690|GO:0006355
Aev01g2973 384 SMART mt_12 208 238 IPR003690 GO:0003690|GO:0006355
Aev01g2973 384 SMART mt_12 139 171 IPR003690 GO:0003690|GO:0006355
Aev01g2973 384 SMART mt_12 276 307 IPR003690 GO:0003690|GO:0006355
Aev01g2973 384 SMART mt_12 103 134 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g2973 Aev-Chr1 31473680 31474834 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Aev01g2973 mTERF 3.6e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g2973 K15032 - twl:120012851 298.13