Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g2972 ATGCGGGGATCTCATCGCAAATCCCTGTTCTTCCTCTCTGTCGTAGCAAGATCCACCTCACTCCCATTTCCAAGGGCGCATGTCTCTTCATCGTCATCTTCACCCATCTGTGCTTTCCATTACAGCACATCCACATCCACAGACACCTCAAGAAACGAATCCTTTGCGGTGAATTACCTCATCAACAATTGTGGGTTCCTCCCAGATTCCGCATTACGCGCTTCCAAACACCTCCGTTTCCGCAACCCTGAGAAAGCAGATTCAGTCCTCGCACTCTTCAGGAGCTTCGGATTCTCAGATTCCGCATTGCACCACGTCGTTCGAAGAGTACCCAGGGTTCTCGCGAGCCACCCCACAAAGACCCTCTCGCCAAAGCTCCAATTCCTCATATCCAAAGGTGCTTCTACCTCACAACTCGCTCGCATCATCTCCCTCAACCCCAATATCTTGCAAAGAAGCTTGCAAAATCACATAATACCCACTTTCAATTTTTTAAACTCCTTTCTTCAATCCGAGGAAAAAACCATTTTCTGTATTGCACGTGGGATTCAACTCCTCTCTTTTTCTGGCCTTCAACGCAACATCGCCTTGTTGGTTGATTCTGGGGTCCGTGAGAAAAGTATTGCAAGGATGCTTCGCCAGTGGCCATGGTTAATAGCATTTAATTCCGATAACCTTAGGACTAAAGTTGAGGAAGTCATGGAAATGGGAATTGAACCTTCAAGATCAAGTTTCGTTCCTGCATTGTATGCTAGAGTGTTGCCTAAGTCCATGTGGGATAAGAAGGTTGAGTTGCTTAAGAGGTTGGGGTGGACGGATGATGCGTTTCGCAAGGCGTTTGTGAAACACCCTTTCTGTGTGCTGACATCTGAGCACAAAATTGAGGCCTGCATTGGGTTCTTTGTCGACAAACTCGGCTGTGAGCCTCTTTTGATTGCCGAATATCCTGTGCTTCTCTCACTGAGCTTGGAGAAAAGGATTATTCCTAGGGCTGCTGTCTTGCAAGCTCTTATGTCGGCCGGTCTGATTAGGCGAACAACATACATCTGTGCACATACTGTTTCTGAAATGGTGTTCCTTCGGAGGTATGTGAATCGTTTCAAGGATCAAGCTCCTCAGTTGTTGAAGCTGTATCACGACAAAATGAAACTCAAAGAAATGGATAGTCAATAG 1173 0.4655 MRGSHRKSLFFLSVVARSTSLPFPRAHVSSSSSSPICAFHYSTSTSTDTSRNESFAVNYLINNCGFLPDSALRASKHLRFRNPEKADSVLALFRSFGFSDSALHHVVRRVPRVLASHPTKTLSPKLQFLISKGASTSQLARIISLNPNILQRSLQNHIIPTFNFLNSFLQSEEKTIFCIARGIQLLSFSGLQRNIALLVDSGVREKSIARMLRQWPWLIAFNSDNLRTKVEEVMEMGIEPSRSSFVPALYARVLPKSMWDKKVELLKRLGWTDDAFRKAFVKHPFCVLTSEHKIEACIGFFVDKLGCEPLLIAEYPVLLSLSLEKRIIPRAAVLQALMSAGLIRRTTYICAHTVSEMVFLRRYVNRFKDQAPQLLKLYHDKMKLKEMDSQ* 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g2972 390 Gene3D Transcription termination factor 3, mitochondrial 67 190 IPR038538 -
Aev01g2972 390 Gene3D Transcription termination factor 3, mitochondrial 191 370 IPR038538 -
Aev01g2972 390 PANTHER CGI-12 PROTEIN-RELATED 44 384 IPR003690 GO:0003690|GO:0006355
Aev01g2972 390 Pfam mTERF 90 181 IPR003690 GO:0003690|GO:0006355
Aev01g2972 390 Pfam mTERF 191 351 IPR003690 GO:0003690|GO:0006355
Aev01g2972 390 SMART mt_12 277 308 IPR003690 GO:0003690|GO:0006355
Aev01g2972 390 SMART mt_12 309 343 IPR003690 GO:0003690|GO:0006355
Aev01g2972 390 SMART mt_12 104 135 IPR003690 GO:0003690|GO:0006355
Aev01g2972 390 SMART mt_12 140 171 IPR003690 GO:0003690|GO:0006355
Aev01g2972 390 SMART mt_12 209 239 IPR003690 GO:0003690|GO:0006355
Aev01g2972 390 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN, PUTATIVE ISOFORM 1-RELATED 44 384 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g2972 Aev-Chr1 31470205 31471377 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Aev01g2972 mTERF 1.9e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g2972 K15032 - vvi:100257952 296.589