Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g2970 ATGTCCACCTCTAGAACCACCCCATCAGAAACACCCTTCATCAAGGGATATGATCCCAATAACCAAGCCCAAATGTGCTTGTCACTTCTCCAAAGAAACACATCACCATGTGGTGAGAAAAGAGGGAGAAGGAAGCAGTCAGAGCCAGGGAGGTTCCTTGGTGTTAGGAGAAGACCTTGGGGAAGATATGCTGCTGAGATCAGAGACCCTACAACCAAAGAGAGGCATTGGCTTGGAACCTTTGACACTGCTCAAGAAGCAGCACTTGCTTATGACAGAGCTGCTTTGTCCATGAAAGGAAGCCAAGCAAGAACAAACTTCATTTACACTGATAACATCAATTTCCATGCTCTTCTTTCACCTATGGATGTTCAAGCCCTCATGCCACCTTCACAACAACACTTCCAACACCAAACTACTACTACTACTACTACTACTAACACTCATCAAGCCAAGCAACCACCATCTAATCATCAGAATAGCTTCTCTCTGCAGATTAATACTTCTTCCTCCTCTTGTTCCCATAGCATTGAGAACCCTTCAGTACTTGTGAACAATGACAACATGAGTGTTGAAACTCCTTATGGTTCAGCTCAGGATGACAATTTCTTCTTTTCCAATAATGACTATAACAACAACTCTGGCTATTTGGAATGCATTGTTCCTGATAACTGTTTCAGGCCTGCTTCCAGTAGTACTACCAACAGTTCTTCATCCAACTCAAGAAAAAGCAATGTGAGTGCTGCTTCAAGTAATGATCAAAAAGTTATTAGCCCAATTTACACAACAAGCTCCTCCATGGAGATAAGTAGTCATCATCAATCATATCATCTTGACATGGCCCCATTCTCTCAAGATCAAGCCATAGCAATGCCACCGAGCAGGGTATCAGAACTTTCTTATCCAACAAGTGAAGTAATCAGTCAAGGTTTCTTGGATAGTAATCAGCAATCCTCATGGGATTGGAATTCAAGTGAACTTTCTGCAATATTCAACAACAACACCACATCAAGGGCTGAAGAAGAAATGTGCATGGATGCATTGTATGATCCAATCATCATGGCTGAGAATAATAATCTGAGCTATGGGGTAATGAATCATCATCATCAGCAGCATCAGACTTCTTCATCAAGTAACTGTTCATCACCACCATCACTACTTGCTCCTCCACCATTTGGGGACGTAGACTTGGGGTACTACCCACTCTACTGA 1212 0.4241 MSTSRTTPSETPFIKGYDPNNQAQMCLSLLQRNTSPCGEKRGRRKQSEPGRFLGVRRRPWGRYAAEIRDPTTKERHWLGTFDTAQEAALAYDRAALSMKGSQARTNFIYTDNINFHALLSPMDVQALMPPSQQHFQHQTTTTTTTTNTHQAKQPPSNHQNSFSLQINTSSSSCSHSIENPSVLVNNDNMSVETPYGSAQDDNFFFSNNDYNNNSGYLECIVPDNCFRPASSSTTNSSSSNSRKSNVSAASSNDQKVISPIYTTSSSMEISSHHQSYHLDMAPFSQDQAIAMPPSRVSELSYPTSEVISQGFLDSNQQSSWDWNSSELSAIFNNNTTSRAEEEMCMDALYDPIIMAENNNLSYGVMNHHHQQHQTSSSSNCSSPPSLLAPPPFGDVDLGYYPLY* 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g2970 403 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF086 2 380 - -
Aev01g2970 403 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 2 380 - -
Aev01g2970 403 CDD AP2 51 107 IPR001471 GO:0003700|GO:0006355
Aev01g2970 403 PRINTS Ethylene responsive element binding protein signature 74 90 IPR001471 GO:0003700|GO:0006355
Aev01g2970 403 PRINTS Ethylene responsive element binding protein signature 52 63 IPR001471 GO:0003700|GO:0006355
Aev01g2970 403 MobiDBLite consensus disorder prediction 131 179 - -
Aev01g2970 403 SUPERFAMILY DNA-binding domain 52 108 IPR016177 GO:0003677
Aev01g2970 403 ProSiteProfiles AP2/ERF domain profile. 51 108 IPR001471 GO:0003700|GO:0006355
Aev01g2970 403 MobiDBLite consensus disorder prediction 367 387 - -
Aev01g2970 403 Gene3D AP2/ERF domain 51 109 IPR036955 GO:0003700|GO:0006355
Aev01g2970 403 SMART rav1_2 51 114 IPR001471 GO:0003700|GO:0006355
Aev01g2970 403 MobiDBLite consensus disorder prediction 367 383 - -
Aev01g2970 403 Pfam AP2 domain 54 100 IPR001471 GO:0003700|GO:0006355
Aev01g2970 403 MobiDBLite consensus disorder prediction 230 252 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g2970 Aev-Chr1 31457224 31458435 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g2970 1 281 AP2-EREBP Transcription Factor Family AT5G18560 42.368 1.55e-59 195
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Aev01g2970 AP2 2e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g2970 - - gmx:100793333 350.517
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g2970 01 31457224 31458435 Aev04g0333 04 2094918 2095982 PCT