Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g2962 ATGGATAAGGCTGTTGGAGGAAGTTGGTCGAAGGAGGAGAGTGGTGGTACTGGGATGATGAAGGAACAGGAGAGGCTGGTGCCAATAGCGAACGTAGGAAGAATAATGAAGCAGATTCTGCCTCAGAACGCTAAGATCTCCAAGGAGGCAAAGGAGACTATGCAGGAATGCGTGTCGGAGTTCATAAGCTTCGTGACGAGCGAGGCTTCCGAGAAGTGCAGGAAGGAGCGGAGGAAGACGGTGAATGGCGACGACATATGCTGGGCCCTGGGGACACTCGGCTTTGACGACTATGCTCATCCAATCACAAGGTACTTGCATCGATACAGAGACCTTGAGCTAGATCATAACAATAACAGAGACAGAGCAGGGAATTAA 378 0.5053 MDKAVGGSWSKEESGGTGMMKEQERLVPIANVGRIMKQILPQNAKISKEAKETMQECVSEFISFVTSEASEKCRKERRKTVNGDDICWALGTLGFDDYAHPITRYLHRYRDLELDHNNNRDRAGN* 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g2962 125 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 1 121 IPR027113 GO:0001228|GO:0006355|GO:0016602
Aev01g2962 125 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 27 90 IPR003958 -
Aev01g2962 125 ProSitePatterns NF-YB/HAP3 subunit signature. 57 73 IPR003956 GO:0005634|GO:0006355|GO:0043565
Aev01g2962 125 SUPERFAMILY Histone-fold 23 119 IPR009072 GO:0046982
Aev01g2962 125 Gene3D Histone, subunit A 17 125 IPR009072 GO:0046982
Aev01g2962 125 PRINTS CCAAT-binding transcription factor subunit A signature 92 110 - -
Aev01g2962 125 PRINTS CCAAT-binding transcription factor subunit A signature 54 72 - -
Aev01g2962 125 PRINTS CCAAT-binding transcription factor subunit A signature 73 91 - -
Aev01g2962 125 MobiDBLite consensus disorder prediction 1 23 - -
Aev01g2962 125 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y PROTEIN 1 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g2962 Aev-Chr1 31404541 31404918 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g2962 19 124 CCAAT-HAP3 Transcription Factor Family AT2G47810 73.585 5.93e-56 170
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Aev01g2962 CBFD_NFYB_HMF 1.7e-27 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g2962 K08065 - gmx:100794513 194.512