Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g2959 ATGTCGTCGTGTAGTTATCAGCACCCTCTTAGAAGAGCTTTCATTCTCTTCCTCACCAAGAACGCTACCACCTTCCCTCAACCCTCTCCATCCCCAAAACTAAACCAACACAAGCACCGCTTCTTCTCAGCAAAAACCATCTCAGATCAACGGTCCTCCTCCTTCACTGTGTCCTACCTCAGAGACAAGTGTGGATTGTCTCAAGCAGCTGCTCTCAAAGCATCCAAGCGTGTTCATTTCGACTCTCCCCTGAAGCCCGATTCAAATCTCTCCTTCTTCAGAGGCCTCGGTTTCTCCAACTCCCAGATCAACAGCATCATCGCCAAGGAACCTTCTCTGCTTGCCTGCCACCCCAACAAAAGTGTGTTGCCAAAGTTCCAATTTTTAGCCTCCAAGGGTGCTTCTCACGATGACATTGTCCTCATGGTGAATAGGACCCCACGGCTCCTGCGTCATAGCCTTCAGAATTTCATAGTCCCTTTGTATGAACTGGTAAGCAGGTTCTGTCCCTCTGATGACAAAGTCATTGCTTACCTTATCGCATGCCTCCCTTCACTATGTGATACTCGTTTCCATCGTAATGCGAAATTGCTCCTTCGTCAAGGCTTGACTGCCTCCAACATTCACCATTTGCTTAGAACTAGGCCTTCTGTACTGTGTTCTGGTGAGTTGATTAAAACTGTGGAGGAACTCAAGCAATTGGGGTTTCATCCTTCCAAGCTTGAGTTCAGTATTGCATTGCTGGCTAAAAGGACTGTTAACAAATCCAAATGGGATGCCAAAGTTGAAGCCTTTAAGAAGTGGGGCTGGTCTGAGCAGGATATTTTTGGGACGTTTAGGAGGCATCCGCATGTTATGTTGCGGTCTGAGGAGAAGCTCAATTCAGTGATGAGCTTCTGGATTGGTCAGCTTGGCTGGGATCGGTCAACACTCTGCTCGAATCCGTCACTTTTCTCATATAGTTTGGAGAAAAGGCTTATTCCAAGGGCTTCAGTTGTCAAGTATCTTCTCTCCAAAGGTTTGATGAAGAAGAATGCCAGCTTAGCTACACCATTTGCTTTACCTGAGGAGATGTTCCTGCAAAAGTATGTGACGCGTTTTTCGGAGAATGATACATCTCAGCTAGTAAAGCTATATCAGGGAGGATGTTAG 1152 0.4653 MSSCSYQHPLRRAFILFLTKNATTFPQPSPSPKLNQHKHRFFSAKTISDQRSSSFTVSYLRDKCGLSQAAALKASKRVHFDSPLKPDSNLSFFRGLGFSNSQINSIIAKEPSLLACHPNKSVLPKFQFLASKGASHDDIVLMVNRTPRLLRHSLQNFIVPLYELVSRFCPSDDKVIAYLIACLPSLCDTRFHRNAKLLLRQGLTASNIHHLLRTRPSVLCSGELIKTVEELKQLGFHPSKLEFSIALLAKRTVNKSKWDAKVEAFKKWGWSEQDIFGTFRRHPHVMLRSEEKLNSVMSFWIGQLGWDRSTLCSNPSLFSYSLEKRLIPRASVVKYLLSKGLMKKNASLATPFALPEEMFLQKYVTRFSENDTSQLVKLYQGGC* 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g2959 383 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 28 381 - -
Aev01g2959 383 SMART mt_12 276 307 IPR003690 GO:0003690|GO:0006355
Aev01g2959 383 SMART mt_12 104 135 IPR003690 GO:0003690|GO:0006355
Aev01g2959 383 SMART mt_12 308 342 IPR003690 GO:0003690|GO:0006355
Aev01g2959 383 SMART mt_12 209 237 IPR003690 GO:0003690|GO:0006355
Aev01g2959 383 Pfam mTERF 90 239 IPR003690 GO:0003690|GO:0006355
Aev01g2959 383 Pfam mTERF 190 359 IPR003690 GO:0003690|GO:0006355
Aev01g2959 383 Gene3D Transcription termination factor 3, mitochondrial 172 370 IPR038538 -
Aev01g2959 383 PANTHER CGI-12 PROTEIN-RELATED 28 381 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g2959 Aev-Chr1 31390620 31391771 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Aev01g2959 mTERF 1.1e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g2959 K15032 - gmx:102667698 332.413
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g2959 01 31390620 31391771 Aev04g1196 04 7665882 7667033 PCT