Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g2958 ATGCCTCAGTTCAAATATCATCCTCTAAGTCTAAGAAGAGCCCTTCTCTACCACCATAAGAACACTAACACTATCTCTGACCCAAAATGTTACCTTTTTCTGCATCTGAAGAGCCACCACCCTATCAATTTCTTCTCTACTTCCACCATCTCAGACCAACAATCATCTTTCACGGCGTCTTACCTCAAAGACAAGTGTGGATTCTCCCAAGAAGCTGCTCTGAAAGCAGTCAAGCAATTCCGTTTCGACTCTCCCCAGAAGCCCGATTCAGTCCTCGCCTTCTTCAGAAACCAGGGTTTCTCACAATCCCAGATCAACAGCATCCTCACCAGGAGACCCATTCTTCTCGTATGCGACACCAACCAAAGGTTATTGCCAAAGTTTCAATTTTTAGCCTCCAAAGGCGCTTCTCGCGATGACATGGTCCTCATGGCCACTAGGAACCCTCGTTTCCTGTGTAATAGCCTTGAGAACCAAATAGTCCCTATGTACGAATTCGTAAGGAGGTTCTTTCCCTCTGATGAGAAAGTCATCGCTTTGATAACTTCATTCCCACCTTGCATTTCTGAAACTCGTGTGCGACTGAATGTGAATATGCTCCTAGATGAGGGCTTGTCTGACTGCGGCATTCGCCATTTGTTTAGTACTAGGCCTTCAATACTCTCTTCTTCTGATACGATTGGCCTCCGTAAATCTGTGCAGGAAGTGAAACAATTGGGGTTTCACCCTTCTAAGGTACATTTCAGTGTGGCACTGTTGGCCAAAATTATTGTTACCAAATCTCAGTGGTATGCCAAAGTTGAAGCCTTTAAGAAATGGGGTTGGTCTGAACAAGAAATTCTTGATGCGTTTAGGAGGCATCCGAGGGTTATGCTTCGATCTACGGACAAACTCAATGCAGTGATGAGCTTCTGGATTGGTAAGCATGGCTGGGATCGTTCAGCTCTCCGCATAAGACCGACAATTTTTGGATTTAGTTTGGAGAAAAGGTTAATTCCAAGGGCTCCAGTTGTCAAGTATCTTCTCTCCAAAGGTTTGATGAAGGAGACTGCTAGCTTAGCTACACCATTTGATTTGACTGATGAGTTGTTCCTGCAAAGATTTGTGACTTGTTTTTCTGAGAATGATCGATCTCAGCTAGTAAAGCTATATCAGGGAGGATCTTAG 1167 0.443 MPQFKYHPLSLRRALLYHHKNTNTISDPKCYLFLHLKSHHPINFFSTSTISDQQSSFTASYLKDKCGFSQEAALKAVKQFRFDSPQKPDSVLAFFRNQGFSQSQINSILTRRPILLVCDTNQRLLPKFQFLASKGASRDDMVLMATRNPRFLCNSLENQIVPMYEFVRRFFPSDEKVIALITSFPPCISETRVRLNVNMLLDEGLSDCGIRHLFSTRPSILSSSDTIGLRKSVQEVKQLGFHPSKVHFSVALLAKIIVTKSQWYAKVEAFKKWGWSEQEILDAFRRHPRVMLRSTDKLNAVMSFWIGKHGWDRSALRIRPTIFGFSLEKRLIPRAPVVKYLLSKGLMKETASLATPFDLTDELFLQRFVTCFSENDRSQLVKLYQGGS* 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g2958 388 Gene3D Transcription termination factor 3, mitochondrial 172 375 IPR038538 -
Aev01g2958 388 Pfam mTERF 92 192 IPR003690 GO:0003690|GO:0006355
Aev01g2958 388 Pfam mTERF 190 364 IPR003690 GO:0003690|GO:0006355
Aev01g2958 388 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 21 386 - -
Aev01g2958 388 PANTHER CGI-12 PROTEIN-RELATED 21 386 IPR003690 GO:0003690|GO:0006355
Aev01g2958 388 SMART mt_12 313 347 IPR003690 GO:0003690|GO:0006355
Aev01g2958 388 SMART mt_12 178 206 IPR003690 GO:0003690|GO:0006355
Aev01g2958 388 SMART mt_12 211 242 IPR003690 GO:0003690|GO:0006355
Aev01g2958 388 SMART mt_12 281 312 IPR003690 GO:0003690|GO:0006355
Aev01g2958 388 SMART mt_12 142 172 IPR003690 GO:0003690|GO:0006355
Aev01g2958 388 SMART mt_12 106 137 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g2958 Aev-Chr1 31388103 31389269 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Aev01g2958 mTERF 1.8e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g2958 K15032 - gmx:102667698 319.701
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g2958 01 31388103 31389269 Aev01g2958 01 31388103 31389269 ECH
Aev01g2958 01 31388103 31389269 Aev04g1195 04 7660517 7661668 PCT