Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g2947 ATGCTCAATCCTGAAGGAGAACTTAAAATAAGTTTTGGCTACCAATGCAATAGTGACAGAGGTATCCCTTGTGAGGTTGCCAATGGCTTCAAAATCCTTCCTGAAGTCCGTAGAACTAGCAGTTTCTCTTGCTTGTCGGGTGCAGCCTTAAGTGCAAACGCCACACTAGCCAACACAAACATCTGCAATGGTAAGATAGGAGGAGAGATCCTTCCAAGCTGGGACTCTCCTAATTCATTCCGTAAGGTGCCTTCTTCACCGAGTCTGTCAAAGCTGGAACGACTATCTTCCTCTCTCCCGAGTAGTTTGTCTTACCTAAGCTGCAGCCCTTCCACTTGCAGTGATATACTAGAATATGACTCTTGCACATTGAAGTCCATGAGTGATCCTTCTAGAAGTGAAGGTTTTCTTAGTGCTACAGAATTACAAGTAGCAGGAGGTGCTGCTGGTGAAGATAGAGTTCAAGCAGTTTGTTCTGAAGAAAATGGTTGGCTCTTTTGTGCAATTTATGATGGCTTTAATGGCAGAGATGCTGCCGACTTTCTAGCTGGTACCCTGTACGACACCATTATATCTCACTTTAACAAGTTGATTTGGGAATTCGAGCCAGGTTCCGTCGAAGCTTCTGACGATTTGAGTCTGGGAGGAACCCATCAATATAAGTTGGATGATAGCCTTATTTGTCGTGCGGACCAATCTCTTTATAGGTTTGAGAGAAATAATGATTCTAATCTTGGCTGTTTTGCAAAAAGTTCTCCATCTGCTAAGCCAGAAGCATCATGTAAATCTTTTTCACATAGGGTACTTGACAGCCTCCAATGCGCTCTAAGTCAGGCTGAGAATGATTTCTTATACATGGTTGAGCAGGAAATGGAGGAACGTCCAGATTTAGTTTCTATTGGATCTTGTGTTTTACTTGTGCTTCTTCACGGTAACGATTTGTATACACTTAATCTAGGTGACAGCAGAGCAGTATTGGCAACATGCAGTACAGGTGACAGAGTGAATGAGAGACTCAAGGCTATCCAGCTTACAGATAGTCATACTGTTGATAATGAAGCCGAAAGATCGAGACTTCTTGCTAACCATCCTGATGATCCCAGGGTCATTGTGGCTGGAAAAGTGAAAGGGAAACTGAAGGTTACTCGAGCTTTTGGAGTCGGCTACTTGAAAAAAAAAAATCTGAATGATGCTTTGATGGGAATTCTTCGAGTTCGTGATCTTACTAGCCCTCCGTATGTTTCCACTCAACCATGTCTCAATGTCCACAGAATCTCGAATTCGGACCAGTTCGTAATAGTAGGGAGTGATGGGTTGTTTGACTTCTTCAGCAATGATGAGGCAGTAATGCTTGTGGAGTCTTACATCTTGAGTAACCCTTTGGGTGATCCAGCAAAGTTTCTCATAGAGCAGCTTGTAGCTAGAGCAGCTGATTCTGCAGGTTTGACCATGGAAGAGTTGATGAACATTCCTGATGGCAGGAGAAGGAAGTACCATGATGATGTGACTGTAATTGTGATCATGCTTGGGATGAATCAGAGAACTTCAAAGGCATCAACTTGCATCTAA 1569 0.4308 MLNPEGELKISFGYQCNSDRGIPCEVANGFKILPEVRRTSSFSCLSGAALSANATLANTNICNGKIGGEILPSWDSPNSFRKVPSSPSLSKLERLSSSLPSSLSYLSCSPSTCSDILEYDSCTLKSMSDPSRSEGFLSATELQVAGGAAGEDRVQAVCSEENGWLFCAIYDGFNGRDAADFLAGTLYDTIISHFNKLIWEFEPGSVEASDDLSLGGTHQYKLDDSLICRADQSLYRFERNNDSNLGCFAKSSPSAKPEASCKSFSHRVLDSLQCALSQAENDFLYMVEQEMEERPDLVSIGSCVLLVLLHGNDLYTLNLGDSRAVLATCSTGDRVNERLKAIQLTDSHTVDNEAERSRLLANHPDDPRVIVAGKVKGKLKVTRAFGVGYLKKKNLNDALMGILRVRDLTSPPYVSTQPCLNVHRISNSDQFVIVGSDGLFDFFSNDEAVMLVESYILSNPLGDPAKFLIEQLVARAADSAGLTMEELMNIPDGRRRKYHDDVTVIVIMLGMNQRTSKASTCI* 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g2947 522 CDD PP2Cc 149 507 IPR001932 -
Aev01g2947 522 Pfam Protein phosphatase 2C 262 472 IPR001932 -
Aev01g2947 522 Gene3D - 105 518 IPR036457 -
Aev01g2947 522 PANTHER PROTEIN PHOSPHATASE 2C 2 521 IPR015655 GO:0004722|GO:0006470
Aev01g2947 522 PANTHER PROTEIN PHOSPHATASE 2C 40-RELATED 2 521 - -
Aev01g2947 522 SMART PP2C_4 127 507 IPR001932 -
Aev01g2947 522 ProSiteProfiles PPM-type phosphatase domain profile. 136 509 IPR001932 -
Aev01g2947 522 SUPERFAMILY PP2C-like 149 510 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g2947 Aev-Chr1 31336940 31338719 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g2947 3 522 PP2C-type Phosphatase Gene Family AT3G16560 61.977 0.0 583
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g2947 - - gmx:100808304 863.603
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g2947 01 31336940 31338719 Aev04g1185 04 7567687 7570938 PCT