Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g2944 ATGGAAAACGAGGAAGGGAAGATCACCGAGCTATACATTCCAAGGAAGTGCTCTGCTACGAACAGATTAATCACTGCAAAGGACCATGCTTCCGTTCAAATTAACGTTGGCCATTTGGATGAGACTGGTGTCTACAACAATCAATCCTCCACATTCGCCCTCTGTGGCTTCATCCGAGCACAGGGAGATGCAGACAGTGCGCTAGATCGCTTGTGGCAGAAGAAGAAAGCTGAAACTAAGCAACATTAG 249 0.4699 MENEEGKITELYIPRKCSATNRLITAKDHASVQINVGHLDETGVYNNQSSTFALCGFIRAQGDADSALDRLWQKKKAETKQH* 83
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g2944 82 ProSitePatterns Ribosomal protein S21e signature. 11 19 IPR018279 GO:0003735|GO:0005840|GO:0006412
Aev01g2944 82 Gene3D - 1 81 IPR038579 -
Aev01g2944 82 Pfam Ribosomal protein S21e 1 77 IPR001931 GO:0003735|GO:0005840|GO:0006412
Aev01g2944 82 PANTHER 40S RIBOSOMAL PROTEIN S21 1 82 - -
Aev01g2944 82 PIRSF RPS21e 1 82 IPR001931 GO:0003735|GO:0005840|GO:0006412
Aev01g2944 82 PANTHER 40S RIBOSOMAL PROTEIN S21 1 82 IPR001931 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g2944 Aev-Chr1 31328317 31329315 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g2944 1 82 Cytoplasmic Ribosomal Protein Gene Family AT5G27700 76.829 5.81e-48 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g2944 K02971 - csv:101217283 151.754
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g2944 01 31328317 31329315 Aev04g1184 04 7560191 7561235 PCT