Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g2922 ATGTGTGGGGGTGCCATCATTTCTGATAGCACTGATATGAAGACTAAGAAGCGGGCTCCCTGCAGATTGATGAGCCCGCACGATCTCTGGTCTGACGACCTTGACACCCTCTCATCTCACCTCCTGGGTTTTGACTCCTCTTCCTCCTCCGCCTCCTCCGCCTCTTCCAAAACCCTCCCCTTGATCCCAAACAACAAAGTGATGGCATGCGGCGATGACAAGAAAGGCGGTGTTGTTGCGGAAAAGGAAGAAATGAGAGGGAGAGGGGGGAAGAAGGAGAGGAAGAAGAACGTGTACAGAGGAATAAGGCAGAGGCCATGGGGGAAGTGGGCGGCGGAGATAAGGGATCCACACCAGGGGGTGAGGGTGTGGCTGGGCACCTTCAACTCCCCTGAGGAAGCCGCACGCGCTTACGACGCCGCCGCCATCCGCATCCGTGGACCCAAGGCCAAGCTGAACTTCCCCCTCCCCCAGCCGGCCAAGAGCAAGAGGCCCCGCCTCACCATCGACTTCACTCGCCCCAATCACCAGCTCCCCATTGCCCTGCAGATCCCCCTCAACAACGCGCCTCCTCCTGGGAATAATAGTACTCATCTCCTCCGTGATCTCAGCAAGCACCACCAATTGTTCTCCAGCCTCGAATCCTTCCTCGGATTGGAGGAGGGGGATAACAGTGAGCCTATTCCTGCTCCTGCTCCTAATCCTAATTATCATCATCACGTGGTAGGCGAGTGGGATTCAGTTTCCACCACCAATGACCTGTGGACGTTGGACGACGTCGTCATGCCAAATCGCCACTTGCTCTGA 807 0.5675 MCGGAIISDSTDMKTKKRAPCRLMSPHDLWSDDLDTLSSHLLGFDSSSSSASSASSKTLPLIPNNKVMACGDDKKGGVVAEKEEMRGRGGKKERKKNVYRGIRQRPWGKWAAEIRDPHQGVRVWLGTFNSPEEAARAYDAAAIRIRGPKAKLNFPLPQPAKSKRPRLTIDFTRPNHQLPIALQIPLNNAPPPGNNSTHLLRDLSKHHQLFSSLESFLGLEEGDNSEPIPAPAPNPNYHHHVVGEWDSVSTTNDLWTLDDVVMPNRHLL* 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g2922 268 PANTHER EREBP TRANSCRIPTION FACTOR 1 188 - -
Aev01g2922 268 Gene3D AP2/ERF domain 98 156 IPR036955 GO:0003700|GO:0006355
Aev01g2922 268 SUPERFAMILY DNA-binding domain 98 156 IPR016177 GO:0003677
Aev01g2922 268 CDD AP2 99 155 IPR001471 GO:0003700|GO:0006355
Aev01g2922 268 PANTHER DNA-BINDING DOMAIN 1 188 IPR044808 GO:0003700|GO:0009873
Aev01g2922 268 SMART rav1_2 98 161 IPR001471 GO:0003700|GO:0006355
Aev01g2922 268 PRINTS Ethylene responsive element binding protein signature 99 110 IPR001471 GO:0003700|GO:0006355
Aev01g2922 268 PRINTS Ethylene responsive element binding protein signature 121 137 IPR001471 GO:0003700|GO:0006355
Aev01g2922 268 Pfam AP2 domain 98 147 IPR001471 GO:0003700|GO:0006355
Aev01g2922 268 ProSiteProfiles AP2/ERF domain profile. 98 155 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g2922 Aev-Chr1 31209408 31210993 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g2922 1 261 AP2-EREBP Transcription Factor Family AT3G16770 37.456 8.01e-43 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Aev01g2922 AP2 4.4e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g2922 K09286 - gmx:100779626 147.902
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g2922 01 31209408 31210993 Aev04g1140 04 7238703 7240693 PCT