Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g2906 ATGAATCTCAGCAAGGGATCCTTCTCCACGGTTACTTCCGCTGTTCCCCTCAAATCTGCCGACGCCGTCTCCGACCAGTTTCCGGCGGGTCTTCGGGTTCTTGTGGTGGACGATGATCCCACGTGCCTCATGATTCTTGAGAAGATGCTCCGAACCTGTCTCTACGAAGTTACCAAATGCAATCGGGCTGAGATAGCACTCTCACTTCTGAGAGAGAATAAAAATGGGTTTGACATTGTTATCAGCGATGTGCACATGCCAGACATGGATGGTTTCAAACTTTTAGAGCACATTGGGTTGGAGATGGACCTTCCTGTTATCATGATGTCTGCTGATGATGGTAAAAGTGTTGTTATGAAGGGTGTAACACACGGTGCCTGTGATTACCTCATTAAACCTGTTCGTATAGAGGCTTTGAAGAACATATGGCAGCACGTGGTTCGCAAGAAAAAGAATGAGTGGAAAGATACGGAGCAGTCTGGTAGTGCTGATGAAGGAGATCGACAGCAAAAGGCATCTGATGATGCTGATTACTCGTCCTCAGCAAATGAAGGCAATTGGAGAAACTCAAAGAAGAGGAGGGACGATGAAGAGGAAGCAGAGGAAAGAGATGACACATCCACATTAAAGAAGCCGCGAGTTGTTTGGTCTGTTGAGCTCCATCAACAATTTGTAGCTGCTGTAGATCAACTGGGAATTGACAAAGCTGTACCTAAAAAAATTCTTGAGTTGATGAACGTCCCTGGACTCACTAGAGAAAATGTAGCCAGTCATCTCCAGAAATACCGTTTGTATCTCCGAAGGTTGAGTGGGGTTTCTCAGCATCAGAGTAACATGAACAACTCCTTCATGAGCTCACAGGAGGCAACATTTGGGACAATTTCTTCGATTAATGGAATTGATCTTCAAACACTTGCAGCTACTGGCCAGATCCCAGCGCAGAGTCTTGCCACACTTCAAGCAGCAGGACTTGGTAGGTCGACTGCAAAGGCGGGCTTACCCATGCCTCTCATGGATCAAAGAAACCTTTTCAGTTTCGAAAATCCAAGGATAAGATTTGGTGAAGGGCAACAACAACATTTGAGTAATGGTAAACCAATGAACTTACTTCATGGAATCCCTACCAACATGGAGCCAAAGCAGCTTGCCAATTTACACCAATCTTCCCAAAACCTTGGCAACTTGAATATGCGAGTCAATGCTTCTGCTACGCAGAGCAACCCCTTACTGATGCAGATGGCACAATCCCAACCTAGAGGTCACATGCTAAGCGAAAACAATGGTCCTCATGCTCCCAGACTTCCATCATCTTTGGGGCAGTCTACAGTATCAAATGGAGTTTCTAATGGTGTTCTCAGCAGAAATGGGATTGCTGGCAATAACAGAGGTCCTGCTTATAATCCTGTTCCACAAAGCTCTCCGATGCTGAATTTTCCTATGAATCAAAACGCTGAAATATCTGCCAGTAGTTTCCCTCTTGGAAGTATGTCCAGCATCACAACAAAAGGCACGTTTCAAGAGGAAGTTACTTCCAGAATTAAAGGATCTGGTGGATTTATTCCAAATTATGATATTTTTAGCGAACTAAATAATCAGAAACCACATGATTGGGAGATAACAAACCCAGGTCTTAACTATGATGCCTCACAGCATGCAAATCCTTTACATGGTAAGATTGATGTCTCCCCGTCAGTGGTAGTCCATCAGAGCTTTTCTTCTAACCAACAGAGTGGACCAAGCAGGGGTGCTATGATTGGAAAACCTATGTTCTCTATGGGTGAAAGCATGGAACAAGGTACTCTCCAAAATGCCGGCCAACACCTCAATACACTACTTGCTGACAATTCAATAAGGGTTAAGACTGAAAGAGTTCCTGATGCAAGCTCCCAAACTAACTTCTTCCCTGAGCATTATCCGCAGGATGATCTTATGAGTGCACTTCTGAAACAGCAAGAAGGCATTGGACAAGCCGATGAGTTCGACTTTGATGGATATCCTCTGGATAACATTTCTGTCTAG 2019 0.4453 MNLSKGSFSTVTSAVPLKSADAVSDQFPAGLRVLVVDDDPTCLMILEKMLRTCLYEVTKCNRAEIALSLLRENKNGFDIVISDVHMPDMDGFKLLEHIGLEMDLPVIMMSADDGKSVVMKGVTHGACDYLIKPVRIEALKNIWQHVVRKKKNEWKDTEQSGSADEGDRQQKASDDADYSSSANEGNWRNSKKRRDDEEEAEERDDTSTLKKPRVVWSVELHQQFVAAVDQLGIDKAVPKKILELMNVPGLTRENVASHLQKYRLYLRRLSGVSQHQSNMNNSFMSSQEATFGTISSINGIDLQTLAATGQIPAQSLATLQAAGLGRSTAKAGLPMPLMDQRNLFSFENPRIRFGEGQQQHLSNGKPMNLLHGIPTNMEPKQLANLHQSSQNLGNLNMRVNASATQSNPLLMQMAQSQPRGHMLSENNGPHAPRLPSSLGQSTVSNGVSNGVLSRNGIAGNNRGPAYNPVPQSSPMLNFPMNQNAEISASSFPLGSMSSITTKGTFQEEVTSRIKGSGGFIPNYDIFSELNNQKPHDWEITNPGLNYDASQHANPLHGKIDVSPSVVVHQSFSSNQQSGPSRGAMIGKPMFSMGESMEQGTLQNAGQHLNTLLADNSIRVKTERVPDASSQTNFFPEHYPQDDLMSALLKQQEGIGQADEFDFDGYPLDNISV* 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g2906 672 Gene3D - 31 169 - -
Aev01g2906 672 PANTHER TWO-COMPONENT RESPONSE REGULATOR 8 645 - -
Aev01g2906 672 Pfam Response regulator receiver domain 33 141 IPR001789 GO:0000160
Aev01g2906 672 PIRSF RR_ARR_type-B 11 664 IPR017053 GO:0003677|GO:0003700|GO:0009736
Aev01g2906 672 SUPERFAMILY Homeodomain-like 208 268 IPR009057 -
Aev01g2906 672 MobiDBLite consensus disorder prediction 417 443 - -
Aev01g2906 672 SMART REC_2 31 143 IPR001789 GO:0000160
Aev01g2906 672 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 211 264 IPR006447 GO:0003677
Aev01g2906 672 CDD REC_typeB_ARR-like 33 147 - -
Aev01g2906 672 PANTHER TWO-COMPONENT RESPONSE REGULATOR 8 645 IPR045279 GO:0009736
Aev01g2906 672 MobiDBLite consensus disorder prediction 187 208 - -
Aev01g2906 672 Gene3D - 208 270 - -
Aev01g2906 672 MobiDBLite consensus disorder prediction 153 208 - -
Aev01g2906 672 Pfam Myb-like DNA-binding domain 213 263 IPR001005 -
Aev01g2906 672 MobiDBLite consensus disorder prediction 153 174 - -
Aev01g2906 672 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 210 267 IPR017930 -
Aev01g2906 672 SUPERFAMILY CheY-like 30 153 IPR011006 -
Aev01g2906 672 ProSiteProfiles Response regulatory domain profile. 32 147 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g2906 Aev-Chr1 31120773 31124196 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g2906 65 672 Response Regulator Gene Family AT3G16857 49.774 8.61e-180 523
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-ARR-B Aev01g2906 Response_reg 1.1e-22 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g2906 - K14491 gmx:100814930 1114.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g2906 01 31120773 31124196 Aev01g2906 01 31120773 31124196 ECH
Aev01g2906 01 31120773 31124196 Aev04g1123 04 7067087 7070591 PCT