Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g2903 ATGAATGGCGCGTATATGGTTGATTTCGGGAATGAGTTTGGACTTTGGCGGGTGAGTCTCTTTATCTCCACTCACAGTCACTCACTCAAAATGGTGGATCCAGCTGGAAAAGGATCAGAGTCCTCCGCCCACACCAGCCCTAACTCTGTCGCCAAGACCCCAGACGGTGAGCAGCAGAAGAAGACTTGCGCCGATTGCGGCACCTCCAAGACTCCTCTCTGGAGAGGTGGCCCCGCTGGTCCTAAGTCGCTATGCAACGCGTGTGGGATCAGGAGCCGCAAGAAGAAGAGGGCCATTTTGGGAATTAGCAAGGGTAACGGCGACGATGTTAAGAAGGGAAAAAGAAGCAGCATCAACAATAAGAACAAGGCTAGTGGTGGAGACAGCTTGAATTTGAAGCAGAGATTGTGGATTTTGGGGAGGCAAGTATTGATGCAGAGGTCAAATCACACTCACCACAGGAACAAATTGGGCGAGGAAGAACAAGTTGCTATCTTGCTCATGTCACTCTCTTATGGATCCGTTTATGCCTAG 534 0.5037 MNGAYMVDFGNEFGLWRVSLFISTHSHSLKMVDPAGKGSESSAHTSPNSVAKTPDGEQQKKTCADCGTSKTPLWRGGPAGPKSLCNACGIRSRKKKRAILGISKGNGDDVKKGKRSSINNKNKASGGDSLNLKQRLWILGRQVLMQRSNHTHHRNKLGEEEQVAILLMSLSYGSVYA* 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g2903 177 ProSitePatterns GATA-type zinc finger domain. 63 88 IPR000679 GO:0006355|GO:0043565
Aev01g2903 177 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 59 97 - -
Aev01g2903 177 SMART GATA_3 57 108 IPR000679 GO:0006355|GO:0043565
Aev01g2903 177 ProSiteProfiles GATA-type zinc finger domain profile. 57 93 IPR000679 GO:0006355|GO:0043565
Aev01g2903 177 PANTHER OS01G0976800 PROTEIN 39 177 - -
Aev01g2903 177 Pfam GATA zinc finger 63 97 IPR000679 GO:0006355|GO:0043565
Aev01g2903 177 CDD ZnF_GATA 62 115 IPR000679 GO:0006355|GO:0043565
Aev01g2903 177 MobiDBLite consensus disorder prediction 102 127 - -
Aev01g2903 177 MobiDBLite consensus disorder prediction 32 77 - -
Aev01g2903 177 PANTHER OS01G0976800 PROTEIN 39 177 - -
Aev01g2903 177 MobiDBLite consensus disorder prediction 39 66 - -
Aev01g2903 177 Gene3D - 57 126 IPR013088 GO:0006355|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g2903 Aev-Chr1 31102392 31103363 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g2903 59 177 C2C2-Gata Transcription Factor Family AT3G06740 62.810 7.43e-42 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Aev01g2903 GATA 2e-16 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g2903 - - aprc:113847917 200.675
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g2903 01 31102392 31103363 Aev01g2903 01 31102392 31103363 ECH
Aev01g2903 01 31102392 31103363 Aev06g0780 06 5312594 5313668 ECH