Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g2901 ATGAATTGTATGTTCTTAAACTCAAATAATATTTACCGACCACGGAGAATGGCAGTGACACATGCTGACCTTGAACCAAGCAGGGGAAAGACATGTTTGAGTAGCAAGACATGTGCCTTCCTCATTGTTCTCACAATCCTATTGGGCATCTTCTGCTTCATTCTGTGTCTCATAGCAGAAGCCACACGTTCTAAGGTGACATGGATGAGCACATCTGAGAATGTAAAGGGAGACAAAGCTGAATGTGTTTACAGTGGTAGTGGGAAAATGCCATTGATATGTGCTTTGTGTGCTTTTCTTGGACTAGCAATTGCCATGCTCCTTCAACATGCTTATGTCTTGATGACAGTTAGTAAATCATCACCTGCTTTACTTGCCTTGGATCCTCACTCTGCTTCTGCCAAGTCCTTATCATGGCAAGCTGGTTTTTACTTCATTACAACTTGGATATGTTTTGCAGTAGGAGAGATTCTGCTGTTGGCAGGAGTGAGTGTCGAATTGGGACATCTGAAGAATTGGTCAAAGCCTAGACACACTTGCCACGTCATCACAAGAGGCTTGTTCTCCTCTGCAGGGGCCTTTGCTTTGACCACTGTTTCATTGGCTTCTGGTTTATACATAACAGCACTTCGTGCACACAGAGTCTCTCTGGAGCTAGAAAATCATGTTAGGCGCCAAGTTCTTGAGAGTTCTGCATTCCATGCAAATAATGCTTCTCAACCACATTCCCTTGCCAGGGAGAACCCCACAACCAAAGATGACCTATTATTGTTTCCTCTCGATCCCATCAACGACACCATGTCGCTCAGGCCAAATGAAAGGACCGAGGTTCGCCGCAACCGCTACAAGGTGGCCGTCGACGCCGATGAGGGTCGCCGGAGGAGAGAGGACAACATGGTCGAGATCCGCAAGAGCAAGCGCGAAGAGAGCTTGCTCAAGAAGCGCCGCGAGGGTCTCCAAGCTCAGCAGCAGCAGTTCCCAGCTTCTCTCCAACCTTCCACCGTCGACAAAAAGTTGGAGAGCCTTCCTTCTATGGTAGCTGGGGTCTGGTCAGATGATAGTAATCTGCAACTGGAAGCTACCACGCAGTTTCGGAAGCTGCTTTCGATTGAGAGGAGCCCTCCGATTGAGGAAGTTATTCAATCGGGTGTTGTGCCACGTTTTGTGGAGTTTCTCGTTAGGGAGGATTTCCCTCAACTCCAGTTTGAGGCTGCATGGGCTCTCACGAACATTGCATCTGGAACATCTGAGCACACTAAGGTTGTGATTGATCATGGGGCAGTTCCTATATTTGTCAAGCTACTTAGCTCACCTAGTGATGATGTTCGGGAGCAGGCTGTGTGGGCTTTGGGAAATGTTGCTGGTGACTCTCCTAGGTGCCGTGATCTGGTGCTCAGCCAAGGTGCCCTGATCCCACTATTGGCCCAGTTGAATGAGCACGCAAAGCTTTCAATGCTGAGAAATGCCACATGGACTCTCTCAAACTTTTGCAGGGGCAAGCCACAGCCTCCATTTGATCAGGTGAGACCAGCCCTTCCAGCTCTTGAGCGTTTGGTTTTTTCCAATGATGAAGAAGTTTTGACAGATGCATGCTGGGCATTATCATATCTTTCTGATGGCACAAATGACAAAATCCAAGCAGTTATTGAGGCAGGTGTATGTGCCCGACTGGTGCAGCTCCTTCTGCATCCATCCCCTTCAGTGCTGATTCCTGCTCTTCGTACTGTGGGAAATATTGTGACTGGAGATGATATGCAGACCCAGTGTATTATCAACCATGGTGCTCTCCAATGCCTTTTGAACTTGTTGACAAATACACATAAGAAAAGCATCAAGAAAGAAGCATGCTGGACAATATCAAACATAACAGCTGGGAACAAGGAACAAATACAGGCTGTTATTGAGGCTGGTCTGATTGGTCCCCTGGTCAATCTTCTTCAAAATGCCGAGTTTGACATTAAAAAGGAGGCTGCATGGGCAATTTCAAATGCTACATCTGGTGGTACTCACGAGCAGATTAAGTACTTGGTGAGTCAGGGTTGCATAAAGCCTCTCTGTGATCTGCTTGTCTGCCCCGACCCAAGAATTGTTACTGTCTGTTTGGAAGGCCTAGAGAATATTCTGAAGGTTGGAGAAGCTGAGAAGAGTCTGGGTAACTCTGGAGATGTCAACTTGTATGCTCAAATGATAGATGATGCTGAGGGATTGGAGAAGATTGAAAACCTGCAAAGTCATGACAACAATGAAATATATGAGAAGGCTGTTAAAATCCTAGAAACATACTGGTTGGAAGATGAAGATGACACACTTCCTCCAGGTGATGGAGCTCAGCCTGGCTTCAATTTTGGAAGCAATGAACTTCCAGTCCCATCTGGTGGATTCAACTTCAGTTGA 2394 0.4666 MNCMFLNSNNIYRPRRMAVTHADLEPSRGKTCLSSKTCAFLIVLTILLGIFCFILCLIAEATRSKVTWMSTSENVKGDKAECVYSGSGKMPLICALCAFLGLAIAMLLQHAYVLMTVSKSSPALLALDPHSASAKSLSWQAGFYFITTWICFAVGEILLLAGVSVELGHLKNWSKPRHTCHVITRGLFSSAGAFALTTVSLASGLYITALRAHRVSLELENHVRRQVLESSAFHANNASQPHSLARENPTTKDDLLLFPLDPINDTMSLRPNERTEVRRNRYKVAVDADEGRRRREDNMVEIRKSKREESLLKKRREGLQAQQQQFPASLQPSTVDKKLESLPSMVAGVWSDDSNLQLEATTQFRKLLSIERSPPIEEVIQSGVVPRFVEFLVREDFPQLQFEAAWALTNIASGTSEHTKVVIDHGAVPIFVKLLSSPSDDVREQAVWALGNVAGDSPRCRDLVLSQGALIPLLAQLNEHAKLSMLRNATWTLSNFCRGKPQPPFDQVRPALPALERLVFSNDEEVLTDACWALSYLSDGTNDKIQAVIEAGVCARLVQLLLHPSPSVLIPALRTVGNIVTGDDMQTQCIINHGALQCLLNLLTNTHKKSIKKEACWTISNITAGNKEQIQAVIEAGLIGPLVNLLQNAEFDIKKEAAWAISNATSGGTHEQIKYLVSQGCIKPLCDLLVCPDPRIVTVCLEGLENILKVGEAEKSLGNSGDVNLYAQMIDDAEGLEKIENLQSHDNNEIYEKAVKILETYWLEDEDDTLPPGDGAQPGFNFGSNELPVPSGGFNFS* 798
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g2901 797 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 426 468 IPR000225 GO:0005515
Aev01g2901 797 Pfam Importin beta binding domain 278 362 IPR002652 GO:0006606|GO:0061608
Aev01g2901 797 MobiDBLite consensus disorder prediction 770 797 - -
Aev01g2901 797 Gene3D - 340 763 IPR011989 -
Aev01g2901 797 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 594 637 IPR000225 GO:0005515
Aev01g2901 797 PANTHER IMPORTIN ALPHA 268 788 - -
Aev01g2901 797 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 510 552 IPR000225 GO:0005515
Aev01g2901 797 SUPERFAMILY ARM repeat 272 768 IPR016024 -
Aev01g2901 797 SMART arm_5 541 581 IPR000225 GO:0005515
Aev01g2901 797 SMART arm_5 500 539 IPR000225 GO:0005515
Aev01g2901 797 SMART arm_5 583 624 IPR000225 GO:0005515
Aev01g2901 797 SMART arm_5 626 666 IPR000225 GO:0005515
Aev01g2901 797 SMART arm_5 456 498 IPR000225 GO:0005515
Aev01g2901 797 SMART arm_5 415 455 IPR000225 GO:0005515
Aev01g2901 797 SMART arm_5 372 413 IPR000225 GO:0005515
Aev01g2901 797 SMART arm_5 669 709 IPR000225 GO:0005515
Aev01g2901 797 Coils Coil 302 322 - -
Aev01g2901 797 Pfam Protein of unknown function (DUF1218) 98 199 IPR009606 -
Aev01g2901 797 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 637 665 IPR000225 GO:0005515
Aev01g2901 797 Gene3D - 277 316 IPR036975 GO:0006606
Aev01g2901 797 ProSiteProfiles IBB domain profile. 262 324 IPR002652 GO:0006606|GO:0061608
Aev01g2901 797 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 383 426 IPR000225 GO:0005515
Aev01g2901 797 Pfam Armadillo/beta-catenin-like repeat 626 665 IPR000225 GO:0005515
Aev01g2901 797 Pfam Armadillo/beta-catenin-like repeat 511 538 IPR000225 GO:0005515
Aev01g2901 797 Pfam Armadillo/beta-catenin-like repeat 373 413 IPR000225 GO:0005515
Aev01g2901 797 Pfam Armadillo/beta-catenin-like repeat 542 580 IPR000225 GO:0005515
Aev01g2901 797 Pfam Armadillo/beta-catenin-like repeat 457 498 IPR000225 GO:0005515
Aev01g2901 797 Pfam Armadillo/beta-catenin-like repeat 584 624 IPR000225 GO:0005515
Aev01g2901 797 Pfam Armadillo/beta-catenin-like repeat 670 707 IPR000225 GO:0005515
Aev01g2901 797 Pfam Armadillo/beta-catenin-like repeat 416 454 IPR000225 GO:0005515
Aev01g2901 797 PANTHER IMPORTIN SUBUNIT ALPHA 268 788 - -
Aev01g2901 797 Pfam Atypical Arm repeat 724 768 IPR032413 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g2901 Aev-Chr1 31089720 31094962 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g2901 398 658 U-box Gene Family AT3G46510 24.904 1.67e-09 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g2901 K15042 - gmx:100792804 1007.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g2901 01 31089720 31094962 Aev04g1119 04 7037239 7039633 PCT