Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g2899 ATGAAGCTGTTTGGTTTCCCCTTGAAGGAGGAGTTGGTGGCATCATCATCATCATCAGTAGCAGTAGCAGTAGTAGTGAATAATGATGATGATGGTGATGATCATTATCACGAGTGCCACTACTGCGGTAGGCAATTCAGCAATTCTCAAGCTCTGGGAGGACACCAGAATGCTCACAAGAGAGAACGTAAACAGGCCAGGCTCGCACACTTCAACTACCTCCAACTCCAACATCAACATCATAGCAGCAGCTCCAAAGCAGCAGCATCTACTACTCTTGATCATCACCTGCAGGCTGCACGTCATGGATCACCATCCACCATTAACAATAATAATAATAATAATAACAATATTCATCATCCAGCAATAATAAGTGGCAGCGGTGGTTGTTATTATGGTGCAGGAGGTAGTGATGGTTGGTCAATTCATAGTACTCCAAATCATCATCATCAGTTCCCTACTACTACTAGTCTTTATCCTTGTGGGACTAGAGGCACCAGTGATGATCATGTTCTTTTGCAAACACCGTCGTACCCTCATCAATATGATCATCATCATCTTGATCTCAACCTCACTCTTGCTTGCTCCTCTAATAATAATAACCACGTATTCAAACAATGA 621 0.4267 MKLFGFPLKEELVASSSSSVAVAVVVNNDDDGDDHYHECHYCGRQFSNSQALGGHQNAHKRERKQARLAHFNYLQLQHQHHSSSSKAAASTTLDHHLQAARHGSPSTINNNNNNNNNIHHPAIISGSGGCYYGAGGSDGWSIHSTPNHHHQFPTTTSLYPCGTRGTSDDHVLLQTPSYPHQYDHHHLDLNLTLACSSNNNNHVFKQ* 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g2899 206 Pfam C2H2-type zinc finger 36 61 - -
Aev01g2899 206 PANTHER ZINC FINGER PROTEIN 5 1 198 IPR044299 GO:0010090
Aev01g2899 206 Gene3D Classic Zinc Finger 14 102 - -
Aev01g2899 206 ProSiteProfiles Zinc finger C2H2 type domain profile. 37 64 IPR013087 -
Aev01g2899 206 ProSitePatterns Zinc finger C2H2 type domain signature. 39 59 IPR013087 -
Aev01g2899 206 PANTHER ZINC FINGER PROTEIN 6-LIKE 1 198 - -
Aev01g2899 206 SUPERFAMILY beta-beta-alpha zinc fingers 34 64 IPR036236 -
Aev01g2899 206 MobiDBLite consensus disorder prediction 80 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g2899 Aev-Chr1 31082772 31083392 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g2899 1 67 C2H2 Transcription Factor Family AT5G06650 46.479 4.26e-11 58.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Aev01g2899 zf-C2H2_6 8.2e-06 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g2899 - - csin:114314348 71.2478