Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g2897 ATGGGGAGAGCTCCGTGCTGTGAGAAAGTGGGGTTGAAGAAGGGAAGATGGACTGCTGAAGAGGACAAGATCCTCACTGATTACATCCAACAATACGGTGAAGGTTCTTGGAGGTCCCTTCCCAAGAATGCTGGTTTGTTGAGATGTGGGAAGAGTTGCAGACTGAGATGGATAAATTACTTGAGATCAGATGTGAAGAGAGGGAACATCACTGCTGAGGAGGAAGAGATCATTGTCAAGTTGCATGCTGTTCTCGGTAACAGGTGGTCCGTGATAGCAGGGCATTTACCAGGAAGAACAGACAACGAGATAAAGAACTATTGGAACTCTCATTTGAGGAGAAAGATTTACTGCTTCATGAAATCCTTGAATGAGTCTTTGCCTCCCATTGACATGGCTGCATTAACCGCCGCTTCCAAGAGAAGAGCTGCTTCTGCTCGAGGAACAGCAACTCACCCACCAGCCATGCAACAAGACACCAACATGCAGAGGTCCTCCTCATCAGAATCAGGGAACACTCTGATGAATGAAGTGCTTCAACAACCAATGCATAATCATGAGAGAAAACCCATAACTTCTAATGCCTTTGCTGGTTTGGAGCCTTATTATGACATGATGATGATGATGGAGGGAAGCAACATGAATGGCAGAGTCAAAGGAGAGGCTGGTGAGGACTTGGGACCATACCAATGGCTGGATGATGAGATTATGAAACTCAGCTACATGTTTGAAAATAATGCTAATAACATTGTTGATGAGGACTCTAGCATGAATGAATGTGGAATAGTGGATGAGGAGATGATGATGATGGACACAAATAATAATAGTGGTGTTTGGAGCTCATCAAATAATGCAGCAGAGAACACAACAAGCAGTTCCTCTGTCAATTCTGTGCATGAATATAATCAGTGGCCTGATGTGCAGTTATTGGCAGCAGCTAATGCTGTTCAATCATATAATCAGTGGGACCTTTCTGAAGATGATCACCAGATGGCTACTAGCTTGTGGGGTTCTACCAATGGATTTCATCAATAA 1035 0.4396 MGRAPCCEKVGLKKGRWTAEEDKILTDYIQQYGEGSWRSLPKNAGLLRCGKSCRLRWINYLRSDVKRGNITAEEEEIIVKLHAVLGNRWSVIAGHLPGRTDNEIKNYWNSHLRRKIYCFMKSLNESLPPIDMAALTAASKRRAASARGTATHPPAMQQDTNMQRSSSSESGNTLMNEVLQQPMHNHERKPITSNAFAGLEPYYDMMMMMEGSNMNGRVKGEAGEDLGPYQWLDDEIMKLSYMFENNANNIVDEDSSMNECGIVDEEMMMMDTNNNSGVWSSSNNAAENTTSSSSVNSVHEYNQWPDVQLLAAANAVQSYNQWDLSEDDHQMATSLWGSTNGFHQ* 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g2897 344 SMART sant 13 63 IPR001005 -
Aev01g2897 344 SMART sant 66 114 IPR001005 -
Aev01g2897 344 MobiDBLite consensus disorder prediction 151 171 - -
Aev01g2897 344 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Aev01g2897 344 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Aev01g2897 344 CDD SANT 16 61 IPR001005 -
Aev01g2897 344 MobiDBLite consensus disorder prediction 143 171 - -
Aev01g2897 344 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Aev01g2897 344 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Aev01g2897 344 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 2 294 - -
Aev01g2897 344 Gene3D - 11 67 - -
Aev01g2897 344 CDD SANT 71 112 IPR001005 -
Aev01g2897 344 PANTHER MYB TRANSCRIPTION FACTOR 2 294 - -
Aev01g2897 344 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Aev01g2897 344 Gene3D - 71 116 - -
Aev01g2897 344 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Aev01g2897 344 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g2897 Aev-Chr1 31071990 31074721 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g2897 1 239 MYB Transcription Factor Family AT5G49330 53.036 2.39e-78 241
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Aev01g2897 Myb_DNA-binding 6e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g2897 K09422 - gmx:100805532 359.762
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g2897 01 31071990 31074721 Aev01g2897 01 31071990 31074721 ECH