Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g2855 ATGGAAGCAGAGAGGAGAGAGAAGGCAGAAGCATCATCATCATCATCCATGGCAGCAGCAAATTCTGTGGCATTATTTTCCGATGAGATTCCGAACATCAACGCAACATCATCAATATCATCATCATCAACCTTCATCACTTCTTCTGCCTTCCCTTTCTCATCATCCAGCATCTTTGACATCATTCTCCCACCACCGCTCTCTTCTTCTTCTAATGGCTTCATGGACTTGCTCGCTGTCCATGACTACCCCCCTTCTCTATTTGACTGGCTCCCCACCGGCGCCGGAGACATCACCCGCCACCCTCTCCCCTCTCCGGCCAGCTCTAATGTTCCTGACTGCTCGGAGGTCTTGAACACTCCGGCGTCACCCAACTCGCCGTCGATCTCGTCGTCGTCGAACGAAGCCGCAGCTACAAACATCGAAATCGAAGGTGATGGGAACAAAGAAGTAGTTGGGGATATTGAACACGAAGCAGAGGATGAAGATGGATCAGCTAAAGGAGGAGAAGATCAGGACCAGGACAAGACTAAGAAACAGAGGCTGAAAGCAAAGAAGAAGAATCAGAAGAAGCAAAGAGAGCCAAGATTTGCGTTCATGACAAAGAGCGAAGTGGATCACCTTGACGATGGGTATAGATGGCGCAAGTACGGCCAAAAAGCCGTCAAAAACAGCCCGTACCCCAGGAGCTACTATCGTTGCACCACAGCTGGGTGTGGAGTGAAGAAGCGCGTGGAGCGTTCCTGCGAGGACCCTTCCATCGTAGTAACAACCTACGAAGGCCAGCACACGCACCCTTGTCCCGCCACCTCACGCGCCGCCCTCGCCTTCATGCACGAACCGCCCTCCTCCTCCTTCATTGGATCCGCCGGCGTTGCTGCTCATCACTTCCTTCTGCCACAACAACAACACCACTTTCAGCATCATCAGAGTAATAACAACAATGTTCCACAAGCAGCTTCGTTATATAGTAATAATAACAACTCCAACACTAGCACCGCACCTAATGCGACGTCGTTTGGGAGCAGCTTTGGAGTTCAAAATCATCATCATCCGTCGTCTTTGTTGATTAGGGACAATGGGCTTCTAGAGGACATAATAGTGCCCACGCAGATGAGGAAGGACGACCAAGAGGAACAACATCACTAG 1149 0.5065 MEAERREKAEASSSSSMAAANSVALFSDEIPNINATSSISSSSTFITSSAFPFSSSSIFDIILPPPLSSSSNGFMDLLAVHDYPPSLFDWLPTGAGDITRHPLPSPASSNVPDCSEVLNTPASPNSPSISSSSNEAAATNIEIEGDGNKEVVGDIEHEAEDEDGSAKGGEDQDQDKTKKQRLKAKKKNQKKQREPRFAFMTKSEVDHLDDGYRWRKYGQKAVKNSPYPRSYYRCTTAGCGVKKRVERSCEDPSIVVTTYEGQHTHPCPATSRAALAFMHEPPSSSFIGSAGVAAHHFLLPQQQHHFQHHQSNNNNVPQAASLYSNNNNSNTSTAPNATSFGSSFGVQNHHHPSSLLIRDNGLLEDIIVPTQMRKDDQEEQHH* 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g2855 382 SUPERFAMILY WRKY DNA-binding domain 200 268 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aev01g2855 382 Pfam WRKY DNA -binding domain 209 266 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aev01g2855 382 PANTHER WRKY TRANSCRIPTION FACTOR 48-RELATED 71 368 - -
Aev01g2855 382 MobiDBLite consensus disorder prediction 103 136 - -
Aev01g2855 382 ProSiteProfiles WRKY domain profile. 203 268 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aev01g2855 382 MobiDBLite consensus disorder prediction 101 136 - -
Aev01g2855 382 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 71 368 IPR044810 GO:0003700
Aev01g2855 382 Gene3D WRKY domain 192 269 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aev01g2855 382 MobiDBLite consensus disorder prediction 158 196 - -
Aev01g2855 382 MobiDBLite consensus disorder prediction 305 352 - -
Aev01g2855 382 MobiDBLite consensus disorder prediction 158 179 - -
Aev01g2855 382 SMART WRKY_cls 208 267 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aev01g2855 382 Coils Coil 172 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g2855 Aev-Chr1 30848528 30850383 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g2855 177 376 WRKY Transcription Factor Family AT2G47260 50.711 1.75e-55 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Aev01g2855 WRKY 2.1e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g2855 - - gmx:100788697 294.278
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g2855 01 30848528 30850383 Aev01g2855 01 30848528 30850383 ECH
Aev04g1053 04 6592205 6594555 Aev01g2855 01 30848528 30850383 PCT