Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g2853 ATGACGTACCATAACTCTCGCCGGAGCCCCGCTCCCTTCCGTTCCGGAGGCCGTGGCTTCCACAGCCCGCCGCGTCGCTCTCCGGGAAGAGGCGCAGGAGGTTTCCGTCCAATCGGCGGTGGTGGCGAGGGGTTCAGGCCGATGAGCGCTGACGGTTACGGAGACTACGGGTTCAGCAGTTACCAGGCTCCGCCATTGTCTGGTCACAAGCGAGGGTTTCGCGGAGGTTCACCCGATCGTTTTGAAGCTGGAAACTTTGCCAAACTATTTGTTGGATCTGTGCCCCGAACATCCACTGAAGAAGATATTCGGCCACTGTTTGAGGAACATGGGAATGTGATTGAGGTTGCCCTGATCAAAGATAAAAAAACTGGACAGCATCAAGGTTGTTGTTTCATAAAATATGCTACCTCAGAAGAAGCTGATCAGGCAATTAGAGCATTGCACAATCAGCATACTCTTCCTGGAGGTGTTGGTCCAATCCAAGTGCGGTATGCTGATGGTGAACGAGAACGCCTTGGTGCAGTTGAGTACAAATTATTTGTGGGCTCTCTGAACAAACAGGCTACAGTCAAGGACGTTGAGGAAATTTTCTCAAAATATGGGCGGGTTGAAGATGTTTATCTTATGCGTGATGAGAAGAAGCAAAGCCGTGGATGTGGTTTTGTTAAATACTCGCATAGGGATATGGCATTGGCAGCTATAAATGCACTTAATGGGATCTATACAATGAGGGGTTGTGAACAACCACTGATTGTCCGGTTTGCTGATCCTAAGAGACCTCGTCAAGGAGATTCCAGGGGAACTGCATTTGGTGGTCCAGGGTTTGGTCCTAGATTTGAGGCACCAGGTCCAAGACCTCCATCCAATATTGCTGATCCAATGGGTGATCGCATGCCTCCTCCTAATGCTTGGCGTCCAATGAATGCACCAAATATGGGTCCATCCTCTAATGCCAGCTTTCATGGCATGGGGCCTCCATTACTTCCAAGATCTGGTGACATGGCGTTGCCTGTAAATGCAGGTGGTCCAATGATTGGCATGGGCGGCCCAAAAGATGATCGTTTTCAAGGTCACTCGCTGTCATCAACGCCGCAACAGAATTTTAACCAGCCTATGCCGCAAATTCCACCAGTCAACCAACAGCAACGAATAGCATCATTTCAGAAACCAATTCAATCATCTCAGGAGTTGCCACCTTCCCATCAATTGTACTCTCAAGGTCCCCCCTACTCACAAGCACCCCCACTTTCAACTCTTAGGCCTCTTGGCCAGCCACAACATCCTCTATCTGCTGGTTCTCTACCTCCGCAGCAGTTAGGTGGCATGAATGGACAATTTCCAACTTCACAACCGCAAAGTCAGCAGGCTGCTTTGTCTGCTGCAATTCCTCAGGTTCCCCTTGATGCCAGCTTGAAATCCAATACAGCTTTGACCACTCCAAATCAACAGCAAGTTCCCTCTGTGCAGCAGCAGCCAGTTCAACCTCTTCAGCAGTCCCCCTCTCAGTTAGCTCAGATGCTGTCACAACAAACTCAGAATTTACAAGCTAGCTTTCATTCATCACAGCAGGCCTTTTCCCAGCTTCAACAACAAATACAGATGATGCAACCAGCTAATCAAGCATCAACATTGCAGCAAAATTTAGAAGCTACCAAAAAGCAGTCTCAATGGGCTGGAACTGTACCACAGGCAGTGGCCAACACTCCTGCGGCTGCACCAGCTGCTGATATGCATTTATCTGCATCTGGTGCTTCTGCAGTACCAGTGGTAAGCCAGAATACAGCTCTTGCAAAATGTAACTGGACAGAGCATTTATCTCCTGAGGGCTTCAAGTATTACTACAATAGTGTCACAGGCGAAAGTCGGTGGGAGAAACCCGAGGAGTTGACATTATTTGAACAGCAAAAACAACAGCAAATGATATCTGTTCAGCAGTCTCAAACTCAGTCACACCCTTCAATGGCCCAGCAACTTCCTCAAATCCAACAGGTTCAGCCTCAAGGCCATCTCCCAGGACAGGTTCTCCACCAGCAACAAATACAGCAGCCTTCCTTGTCCTCTTCGGCGTTCCAGGCATATGGAGTTGCAGGTCATCAAAATGCTCAGGAACTTGGTTATAAACAGATACAGCCATCAGCTATTGCTGCTGGCGATCCTGGACGCTACTCACAGGGTATTCATGCTTCCCAAGAGTGGTGGAAAAATAAGCCCGCAGGAGTGTGA 2226 0.4892 MTYHNSRRSPAPFRSGGRGFHSPPRRSPGRGAGGFRPIGGGGEGFRPMSADGYGDYGFSSYQAPPLSGHKRGFRGGSPDRFEAGNFAKLFVGSVPRTSTEEDIRPLFEEHGNVIEVALIKDKKTGQHQGCCFIKYATSEEADQAIRALHNQHTLPGGVGPIQVRYADGERERLGAVEYKLFVGSLNKQATVKDVEEIFSKYGRVEDVYLMRDEKKQSRGCGFVKYSHRDMALAAINALNGIYTMRGCEQPLIVRFADPKRPRQGDSRGTAFGGPGFGPRFEAPGPRPPSNIADPMGDRMPPPNAWRPMNAPNMGPSSNASFHGMGPPLLPRSGDMALPVNAGGPMIGMGGPKDDRFQGHSLSSTPQQNFNQPMPQIPPVNQQQRIASFQKPIQSSQELPPSHQLYSQGPPYSQAPPLSTLRPLGQPQHPLSAGSLPPQQLGGMNGQFPTSQPQSQQAALSAAIPQVPLDASLKSNTALTTPNQQQVPSVQQQPVQPLQQSPSQLAQMLSQQTQNLQASFHSSQQAFSQLQQQIQMMQPANQASTLQQNLEATKKQSQWAGTVPQAVANTPAAAPAADMHLSASGASAVPVVSQNTALAKCNWTEHLSPEGFKYYYNSVTGESRWEKPEELTLFEQQKQQQMISVQQSQTQSHPSMAQQLPQIQQVQPQGHLPGQVLHQQQIQQPSLSSSAFQAYGVAGHQNAQELGYKQIQPSAIAAGDPGRYSQGIHASQEWWKNKPAGV* 742
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g2853 741 Gene3D - 173 266 IPR012677 -
Aev01g2853 741 Gene3D - 82 172 IPR012677 -
Aev01g2853 741 MobiDBLite consensus disorder prediction 1 47 - -
Aev01g2853 741 ProSitePatterns WW/rsp5/WWP domain signature. 602 627 IPR001202 GO:0005515
Aev01g2853 741 MobiDBLite consensus disorder prediction 357 420 - -
Aev01g2853 741 Pfam WW domain 601 627 IPR001202 GO:0005515
Aev01g2853 741 SUPERFAMILY RNA-binding domain, RBD 17 166 IPR035979 GO:0003676
Aev01g2853 741 CDD RRM2_FCA 179 258 IPR034645 -
Aev01g2853 741 SUPERFAMILY RNA-binding domain, RBD 178 279 IPR035979 GO:0003676
Aev01g2853 741 SUPERFAMILY WW domain 601 633 IPR036020 GO:0005515
Aev01g2853 741 MobiDBLite consensus disorder prediction 258 461 - -
Aev01g2853 741 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 180 247 IPR000504 GO:0003723
Aev01g2853 741 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 89 152 IPR000504 GO:0003723
Aev01g2853 741 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 178 258 IPR000504 GO:0003723
Aev01g2853 741 SMART rrm1_1 88 164 IPR000504 GO:0003723
Aev01g2853 741 SMART rrm1_1 179 254 IPR000504 GO:0003723
Aev01g2853 741 MobiDBLite consensus disorder prediction 479 504 - -
Aev01g2853 741 ProSiteProfiles WW/rsp5/WWP domain profile. 602 629 IPR001202 GO:0005515
Aev01g2853 741 SMART ww_5 597 629 IPR001202 GO:0005515
Aev01g2853 741 PANTHER TRANSFORMER-2-RELATED 58 698 - -
Aev01g2853 741 MobiDBLite consensus disorder prediction 431 461 - -
Aev01g2853 741 Gene3D - 596 641 - -
Aev01g2853 741 CDD WW 599 629 IPR001202 GO:0005515
Aev01g2853 741 PANTHER FLOWERING TIME CONTROL PROTEIN FCA ISOFORM X1 58 698 - -
Aev01g2853 741 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 87 168 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g2853 Aev-Chr1 30832615 30841214 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g2853 86 280 Eukaryotic Initiation Factors Gene Family AT2G23350 25.346 8.96e-12 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g2853 - - gmx:100798390 985.326
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g2853 01 30832615 30841214 Aev01g2853 01 30832615 30841214 ECH