Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g2839 ATGGCAATTGAGGAATCAATGGATGTGAAAGGAAGAAGAAGCAACACCAACAACAACATCAACAACACTGCCCTCCTAAGTGAGGATGAGATGGATCTCCGAAGAGGTCCTTGGACCGTTGATGAGGATCTTACCCTCATCAATTACATTGCCACTCATGGCGAGGGTCGTTGGAATTCCCTTGCTCGTTCTGCAGGCCTCAAACGAACTGGCAAGAGCTGCAGATTGAGATGGCTTAACTATCTTCGTCCTGATGTTCGACGTGGAAACATCACACTTGAAGAACAGCTTTTGATTCTTGAGCTCCATACTCGTTGGGGAAACCGATGGTCCAAGATTGCTCAATATTTACCGGGAAGAACCGACAATGAGATAAAGAATTATTGGAGGACTCGTGTCCAGAAACATGCCAAACAACTCAAATGTGACGTGAATAGCAAGCAATTCAAGGACGCCATGCGCTACCTTTGGATGCCAAGGTTGGTGGAGCGCATTCAAGCAGCAGCCGCTTCAACAGCGGCGGCAACCGTAACCGCAATTGCAACCGCTAATTCTCCATCTTTGTCTGTCTCCACCACTACCACCACGAACGTCACCACCGCCAACATTAATAACTCATATCCCTACAACAATTTAGAGGTTCAAAATGGGAAAATGGAGTTGACTCATCAATCGGTTATGATGAAGAGTAATAATGAGTTGATGGGTTCATCTCAGGTTACTACACAAAGTTATAACAATAATACCCCGGAGAATAGTAGCACAGCGGCATCATCAGACTCGTTTGGGACTCAGGTTTCACCAATCTCTGATTTGAATGATTATTACAGCGTCCAAGTTTGTAGTAACAACAACAATAATAATAACCCTAATCCTATTCCTAATCTTGGTGCGGATAATTATTACCAACCCTCTCAAATAAGCTATTCGGAATCATCAAATGGGTCATTTTTCCCTCATCAGGGAATGGATTTTCAAGGCATGATGATGGTGGAGCCAAACACACCGTGGATGCAAAGTGGGGACACGTCGGACAATTTTTGGAATTTTGAGAACATGATGTTTTTACAGCAGCAACTCATGAATGACAACATGTGA 1098 0.439 MAIEESMDVKGRRSNTNNNINNTALLSEDEMDLRRGPWTVDEDLTLINYIATHGEGRWNSLARSAGLKRTGKSCRLRWLNYLRPDVRRGNITLEEQLLILELHTRWGNRWSKIAQYLPGRTDNEIKNYWRTRVQKHAKQLKCDVNSKQFKDAMRYLWMPRLVERIQAAAASTAAATVTAIATANSPSLSVSTTTTTNVTTANINNSYPYNNLEVQNGKMELTHQSVMMKSNNELMGSSQVTTQSYNNNTPENSSTAASSDSFGTQVSPISDLNDYYSVQVCSNNNNNNNPNPIPNLGADNYYQPSQISYSESSNGSFFPHQGMDFQGMMMVEPNTPWMQSGDTSDNFWNFENMMFLQQQLMNDNM* 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g2839 365 CDD SANT 108 131 IPR001005 -
Aev01g2839 365 Gene3D - 92 155 - -
Aev01g2839 365 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 7 360 IPR044676 GO:0003700|GO:0006355|GO:0043565
Aev01g2839 365 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 87 137 IPR017930 -
Aev01g2839 365 Pfam Myb-like DNA-binding domain 88 131 IPR001005 -
Aev01g2839 365 Pfam Myb-like DNA-binding domain 35 82 IPR001005 -
Aev01g2839 365 ProSiteProfiles Myb-like domain profile. 30 82 IPR001005 -
Aev01g2839 365 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 30 86 IPR017930 -
Aev01g2839 365 MobiDBLite consensus disorder prediction 237 264 - -
Aev01g2839 365 Gene3D - 32 88 - -
Aev01g2839 365 ProSiteProfiles Myb-like domain profile. 83 133 IPR001005 -
Aev01g2839 365 SUPERFAMILY Homeodomain-like 32 129 IPR009057 -
Aev01g2839 365 SMART sant 34 84 IPR001005 -
Aev01g2839 365 SMART sant 87 135 IPR001005 -
Aev01g2839 365 CDD SANT 37 82 IPR001005 -
Aev01g2839 365 PANTHER MYB TRANSCRIPTION FACTOR 7 360 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g2839 Aev-Chr1 30746933 30748919 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g2839 7 356 MYB Transcription Factor Family AT3G06490 51.657 1.39e-93 281
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Aev01g2839 Myb_DNA-binding 5.5e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g2839 K09422 - gmx:100791349 432.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g2839 01 30746933 30748919 Aev01g2839 01 30746933 30748919 ECH