Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g2818 ATGGAGGCTAGATCTGGCGGAAAGAATCAATTTTTATATGGGGGTGTTGTGCCAGAAATGAAGGCTGTTGGGAAGAGAAGCTTGGAGTGGGATTTGAATGATTGGAGATGGGATGGGGATCTCTTCACTGCTCATCAGCTCAATTCAGTGCCATCAGATTGTAGGAGCCGCCAGTTCTTTCCACCACATCCTGAGGTTCCTGCAAATTTCAATCATAATAATGCATCAAACAATTTGTCTTGTTCTATTATGAACCCTGTGGAGGGGAAGAGAGAATTGGAGAAAAGGAGAAGAACTGTTGTTATAGGTGAAGAGGGTGGTGAAGGTGAGGAGGAGCTGAATGAGGAAGGTGGTGGTGGTGGTGGTTCTCTTAATTTGAACCTTGGAGGTCAAGTTTACCCTATCATGGTTGAAGAAGGGGATGAAAAAAGTGGGAAGAAGACAAAGGTAATTGGGAGTGCTAGTGTTGCTGCTGCTACCACTTCTTCAAACCGTGCTGTCTGTCAGGTTCAAGATTGTAGGGCTGATCTTAGCAATGCAAAGGATTACCATCGAAGGCATAAGGTTTGTGATATGCATTCTAAGGCTACTAAGGCACTTGTGGGAAATGTTATGCAGCGTTTCTGTCAGCAGTGTAGCAGGTTTCATGAACTTCAAGAGTTCGATGAAGGGAAGAGGAGTTGTCGTAGGCGTCTGGCTGGCCACAATAGGAGAAGGAGGAAAACGCATCCCGATGCTACCGGAGTTAATGGAGGCCTTCTGAATGACGAAAGGGGCAGTAACTATCTGTTGATGAGTTTGATACGGATACTGTCCAATATGCATTCTAATGGGTCAGATCATACAAGGAATCAGGATATTCTCTCTCATCTTCTGGGGAACCTAGCAAGTCTGGCGGGTACACTTAACGAAAGAAGTGTAGCCTCCTTATTGCAGGGATCACAAGGTTTGGTAAATGCTGGGACACCTGGAGCTGCGCATGATGCGCCAAATGGTCCTGAAACCTCCGGGCCTCCTGGTTCTTCCATCAAGACAGATAATGGCCTCATCCGTCCGGATCCTCCGAGGTCTATGGCACAATGTGAGGCAGTTCCTGCAAATGTTGTGACAGAAAAATGTATGCATTCAGATGATGGTGGAGCAGGAAGTTTAAAGCCTACCGGACATCAGCCCTCAAATGGACTTCTATCAAGGGACAGTGTACCATCCCAATCAACCGTAGCAGAGACTCATGTTGGAAGGGATGGATTAAGTAACATTGACCTGAATAGTGTATATGATGATGTACAGGATTGTTTTGAGAATCCTAATAAGTCTTGTCCTCCTTTATGGTTGCAATGTGACTCTCTCAAGTCAAGTCCACCACAGACAAGTAGAAACTCAGATTCAACCTCCACCCACTCACCATCTAGTTCTAGTGGGGAAGCTCAGAGTCGCACGGATCGAATAGTTTTTAAACTCTTTGGCAAGGATCCGAATGATTTTCCTCTTGTTCTCCGATCGCAGATCCTCAACTGGTTGTCCCACAGTCCAACAGAGATTGAGAGCTACATAAGGCCAGGCTGTATCGTACTAACAATATATCTCCGTCTGGAAAAATCTGTGTGGGAGGAGATCTCCTGTAATCTAGGGTCCAGTTTGAGAAAGCTTCTTGCTTCCAATGATTCTTTCTGGAGAACAGGATGGGTATATGCAAGGGTGCAACAATCTGTAGCCTTTCTATATAATGGTCATGTTGTCTTAGATGTGCCCTTGCATCTCAGAAGCCCACAGAATTGTAGGATTTCATGCATTAAACCACTTGCAGTTCCTGCAAATACAAGTGCTAAATTTATTGTGAAAGGATTTAACCTTTTGGGGTCCAGCACAAGGCTGCTTTGTGCTCTTGAAGGGAAGTATCTGGTACATGATAGTTGTCATGATTTGATTGATGTATCTGATGCAACAATTCAGCATCTTAGCTTCTCTTGTCATATACCAAATGTAACTGGGAGAGGGTTTATTGAGCTGGAAGATCATGGTCTTAGCAGCTGTTCCTTTCCATTTATAGTTGCAGAACAAGAAGTTTGTTCAGAGATCTGCAAGCTGGAGAATGTGATTGAGGCAGCCGAAACCACCGATGACATCGTGATGCAGAACCAACAAATAGAAGAAAAGACTCGAGCTATGGATTTCCTACACGAAATGGGCTGGCTCCTTCATAGAACTCGTTTGAAAGTTAGGCTAGGTTCCATGGCACCTATTCAGGATCTCTTCCATTTCAATCGGTTCACGTGGCTTGTTGACTTCTCCATGGACCATGGTTGGTGCGCTGTGATGAAAAAGCTCTTGGACATTATATTCGAGGGGGGTGTTGATACAGGAGAGCATACCTCCATTGAGCTTGCATTGTTGGACATGGGTCTTCTACACAAAGCAGTAAAGAGAAATTCTAGGCCTATGGTGGAACTACTGTTAAAATTTGTACCAGTTAAAACTTCAGATGGTGCAGACAGTAAAGTGAAGCCAGTTGACAAGGGCACTCAAAGATTCTTATTTAGACCTGATAATGTTGGGCCCGCAGGGTTGACTCCCCTTCATGTTGCCGCAAGTACGAAAGGCTCGGAAAATGTCTTGGATGCCCTAACTGATGATCCAGGAATGGTCGGAATTGAAGCATGGAAAAGTGCTAAGGACAGCACAGGTTTGACACCTAACGACTATGCATCCCTCAGAGGCTATTACTCCTACATTCAACTTGTCCAGAGGAACACCAGCAGAAAACTTGAAAGACAGCATGTGGTTGATATCTCTAGCACCCTTGTGGATATTAACACAAAGCAGAAGCAACTAAATGTTCACAGGACATCTAAAGTCTCAAGTTTGCACACCGAGAAGATCGAAGCCGCAGCAACGGCAAGTCAATGCGGGCTATGCCAGCGCAAGCTGGCTTACGGAGGCACAAGAACAGCACTGGTTTATAGGCCTGCGATGCTCTCATTGGTGGCAATTGCAGCTGTGTGTGTCTGTGTGGCTTTGCTCTTCAAGAGCTCACCCAAAGTTTATTATGTGTTCCAGCCTTTCAACTGGGAATCATTGGGATATGGCTATATCTAA 3096 0.4503 MEARSGGKNQFLYGGVVPEMKAVGKRSLEWDLNDWRWDGDLFTAHQLNSVPSDCRSRQFFPPHPEVPANFNHNNASNNLSCSIMNPVEGKRELEKRRRTVVIGEEGGEGEEELNEEGGGGGGSLNLNLGGQVYPIMVEEGDEKSGKKTKVIGSASVAAATTSSNRAVCQVQDCRADLSNAKDYHRRHKVCDMHSKATKALVGNVMQRFCQQCSRFHELQEFDEGKRSCRRRLAGHNRRRRKTHPDATGVNGGLLNDERGSNYLLMSLIRILSNMHSNGSDHTRNQDILSHLLGNLASLAGTLNERSVASLLQGSQGLVNAGTPGAAHDAPNGPETSGPPGSSIKTDNGLIRPDPPRSMAQCEAVPANVVTEKCMHSDDGGAGSLKPTGHQPSNGLLSRDSVPSQSTVAETHVGRDGLSNIDLNSVYDDVQDCFENPNKSCPPLWLQCDSLKSSPPQTSRNSDSTSTHSPSSSSGEAQSRTDRIVFKLFGKDPNDFPLVLRSQILNWLSHSPTEIESYIRPGCIVLTIYLRLEKSVWEEISCNLGSSLRKLLASNDSFWRTGWVYARVQQSVAFLYNGHVVLDVPLHLRSPQNCRISCIKPLAVPANTSAKFIVKGFNLLGSSTRLLCALEGKYLVHDSCHDLIDVSDATIQHLSFSCHIPNVTGRGFIELEDHGLSSCSFPFIVAEQEVCSEICKLENVIEAAETTDDIVMQNQQIEEKTRAMDFLHEMGWLLHRTRLKVRLGSMAPIQDLFHFNRFTWLVDFSMDHGWCAVMKKLLDIIFEGGVDTGEHTSIELALLDMGLLHKAVKRNSRPMVELLLKFVPVKTSDGADSKVKPVDKGTQRFLFRPDNVGPAGLTPLHVAASTKGSENVLDALTDDPGMVGIEAWKSAKDSTGLTPNDYASLRGYYSYIQLVQRNTSRKLERQHVVDISSTLVDINTKQKQLNVHRTSKVSSLHTEKIEAAATASQCGLCQRKLAYGGTRTALVYRPAMLSLVAIAAVCVCVALLFKSSPKVYYVFQPFNWESLGYGYI* 1032
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g2818 1031 MobiDBLite consensus disorder prediction 386 412 - -
Aev01g2818 1031 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 13 1030 IPR044817 GO:0003677
Aev01g2818 1031 MobiDBLite consensus disorder prediction 104 123 - -
Aev01g2818 1031 Gene3D - 158 229 IPR036893 GO:0003677|GO:0005634
Aev01g2818 1031 Pfam SBP domain 168 241 IPR004333 GO:0003677
Aev01g2818 1031 MobiDBLite consensus disorder prediction 451 478 - -
Aev01g2818 1031 MobiDBLite consensus disorder prediction 373 412 - -
Aev01g2818 1031 ProSiteProfiles Zinc finger SBP-type profile. 165 242 IPR004333 GO:0003677
Aev01g2818 1031 MobiDBLite consensus disorder prediction 319 357 - -
Aev01g2818 1031 SUPERFAMILY SBT domain 166 247 IPR036893 GO:0003677|GO:0005634
Aev01g2818 1031 PANTHER TRANSCRIPTION FACTOR SBP FAMILY-RELATED 13 1030 - -
Aev01g2818 1031 SUPERFAMILY Ankyrin repeat 768 914 IPR036770 -
Aev01g2818 1031 Gene3D - 766 957 IPR036770 -
Aev01g2818 1031 MobiDBLite consensus disorder prediction 233 252 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g2818 Aev-Chr1 30553396 30557868 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g2818 1 1029 SBP-box Gene Family AT3G60030 46.635 0.0 783
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Aev01g2818 SBP 4.1e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g2818 - - gsj:114419913 1503.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g2818 01 30553396 30557868 Aev01g2818 01 30553396 30557868 ECH