Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g2796 ATGAAGGGCACTACTACTGAGGATTCCTCCATGATCACTAATAATCCTCCAGGATCTGCTCTTCTGAGTTTGAGCTTGACGAATAATAGCTTAGAAAATAATCCTCTCCAAATAAATCAAGAACATCAGCCCCTGATGATGACGACGACTCAATTGGGATTGCTGCAAAAGAAGGTAGAGGAAATGAAGAAAGAGAATGAGAAATTAAAATTGATGCTAAATCAGATAACAGAACACTATGCTGCTCTTCAGAATCAGTTATTGCTGGCGATGCAGCAGCAGCAACTATCTCATCGAAATCATTCATCTGCTGCTTCTGATGGAATCAAAGAATTAGGATTTGGTTCTCTTGGAAACAACATTCTTCATCACATCAACATAGAAGGCAGAAACATAATTTCATCATCATGTCCTTCCAATAATATCGTTGAACCTAAAACCATCAGTAACCAAATGGCCGCACCACAAGAATCCGATCAAGCATCTTGCAGGAAAGCTAGAGTCTCCATAAGGGCAACATCAGATTTTTCTCTGGTGGGTGATGGATGTGAATGGAGGAAGTATGGGCAAAAGACTTCAAAGGGAAACCCTTGTCCCCGAGGCTACTACCGTTGCAGCATGGGAACATCATGTCCAGTTCGTAAGAAGGTTCAGAGGTGTTCTATGGATGACACAGTTGTGATCACAAGCTATGAGGGGAACCATAACCATCCACTCCCAGCAGCAGCCAGAGCCATAGCCAACACAACATCAGCTGCACTCAACATGTTCCTCTCTGGCTCCATCACTAGTTCTAATAATAATTCAGCCCTCTTCTCTCCTTTATCCATCTCTTCATCTGCCTTGGCTTCATGTCCCACCATAACACTCGACTTAACCCAAAGGGGCATTTCATCAAACACCACATCAGCAGCATTTCCTCTGCCATTAGATATTGGGAGGTTTTACTTGTCATCTAAGCTTCAAGATATGATACTACCCTCATCAGAGACAAACCTTGACATGGTGGATCTTGTGACTGCAGCCATAACCAAGGATCCTTCTCTTAAGGCAGCATTAGTTTCAGCTTTTTCCTCACTCACTCAAACCACTCACAATATTATAAATCAATAA 1113 0.4232 MKGTTTEDSSMITNNPPGSALLSLSLTNNSLENNPLQINQEHQPLMMTTTQLGLLQKKVEEMKKENEKLKLMLNQITEHYAALQNQLLLAMQQQQLSHRNHSSAASDGIKELGFGSLGNNILHHINIEGRNIISSSCPSNNIVEPKTISNQMAAPQESDQASCRKARVSIRATSDFSLVGDGCEWRKYGQKTSKGNPCPRGYYRCSMGTSCPVRKKVQRCSMDDTVVITSYEGNHNHPLPAAARAIANTTSAALNMFLSGSITSSNNNSALFSPLSISSSALASCPTITLDLTQRGISSNTTSAAFPLPLDIGRFYLSSKLQDMILPSSETNLDMVDLVTAAITKDPSLKAALVSAFSSLTQTTHNIINQ* 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g2796 370 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 4 368 - -
Aev01g2796 370 Pfam WRKY DNA -binding domain 181 238 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aev01g2796 370 Gene3D WRKY domain 163 241 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aev01g2796 370 SMART WRKY_cls 179 239 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aev01g2796 370 SUPERFAMILY WRKY DNA-binding domain 172 240 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aev01g2796 370 Coils Coil 52 93 - -
Aev01g2796 370 ProSiteProfiles WRKY domain profile. 174 240 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aev01g2796 370 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 4 368 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g2796 Aev-Chr1 30424685 30426395 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g2796 60 360 WRKY Transcription Factor Family AT4G04450 34.536 5.56e-57 190
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Aev01g2796 WRKY 2e-21 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g2796 - - gmx:100779314 264.233
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g2796 01 30424685 30426395 Aev05g1416 05 10368535 10373544 PCT