Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g2782 ATGGCTTGTTTGAACCACCCTGAGTTAGAGCTTCTTGCTGGGACAGATAAATCTTCTTCTTCTCCTCATGTTATGGAAAGTATTGGTGATAGTAATGTTGATAAAACTAGTGATGATTCCTCTCTGATGCATTTCCATGCTAACTGGCCAATGCTAGCATCTGGACTGAATAATGCAGCGGTTCCAACTCAGTTTACCATCATCTTTAATGGAGGCACTTTTGTCTATGATGGAGTTCCTGCAGAAAAGGTGCAAGAGATAATGCTAATTGCTGCTGCCTATGCCAAGTCTGCTGAAGTGAAGGTTGGGACACAATCCTCCTTCACACCACTCATTCCGACGACCCCTTCTTCTCCGCAAAGAAACTCTAACAACAATTTGGCTTCACAGCAATCTGTGTGCTTCCCTCCAGAAAAGAGTTCCATTTGCAGGCTGCAAGAATTTCCACTAGCACGCAGACAGTCACTTCAGAGGTTCCTTGAGAAGCGAAGAGACAGGTTGTGTAGCAAAGCCCCATATGCTGCTACATCAAAGAAAATGTATGGGAACATAGAGAACAACTTCTTTGCAAACAATGCAGCAGATTTGGGTTCCTTCAAACAATCAAAGGATGGATTTCATATTGCTGCCACTTGA 636 0.434 MACLNHPELELLAGTDKSSSSPHVMESIGDSNVDKTSDDSSLMHFHANWPMLASGLNNAAVPTQFTIIFNGGTFVYDGVPAEKVQEIMLIAAAYAKSAEVKVGTQSSFTPLIPTTPSSPQRNSNNNLASQQSVCFPPEKSSICRLQEFPLARRQSLQRFLEKRRDRLCSKAPYAATSKKMYGNIENNFFANNAADLGSFKQSKDGFHIAAT* 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g2782 211 PANTHER DIVERGENT CCT MOTIF PROTEIN 28 189 - -
Aev01g2782 211 SMART tify_2 58 93 IPR010399 -
Aev01g2782 211 MobiDBLite consensus disorder prediction 111 131 - -
Aev01g2782 211 Pfam tify domain 62 92 IPR010399 -
Aev01g2782 211 Pfam Jas motif 149 173 IPR018467 -
Aev01g2782 211 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 28 189 IPR040390 -
Aev01g2782 211 MobiDBLite consensus disorder prediction 14 37 - -
Aev01g2782 211 ProSiteProfiles Tify domain profile. 58 93 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g2782 Aev-Chr1 30354969 30357594 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g2782 62 173 Tify Gene Family AT5G20900 49.123 1.41e-24 94.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Aev01g2782 tify 1.3e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g2782 K13464 - gmx:100306045 141.739
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g2782 01 30354969 30357594 Aev04g1732 04 13265881 13269781 PCT