Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g2777 ATGGCTCTGTCTTCCACAAAAGAGCCATCAAGAAGACACAGCATAGCGTTCACCTTCTTGTTCATGCTATTACTGGGACACTACACACCATTAGGCTCAGGCAGTGCTCCCACAGATTTCGTGGGATCAGCATGCCTCAAAGTTACCCCTTCAGAATTCATTTCCGCTCTCAGGGAAGTTCTTGGAGTCGTACAAGGTGTCGCTTCCATCTTGTCCAAGTTCAGCGGTCGATTCGGCAGTTTTCGCCTCGCCACCGCCATTCTTGACTGCATCGATTTGCTTGACATGTCCTCTGATGAGCTCAACTGGTCTCTCTCTGCCACTCAGAATCCTCAAGGGAAGCATAACAGTAGTGGGAATCTAGGGTCAGATTTGAAGACATGGCTAAGTGCAGTCCTATCGAACCCAGACACGTGTCTTGAGGGATTGGAAGGAACAAACAGCGTTGTGAAAGGTCTAGTTTCCACCGGCCTTGGACAAGTGATGTCTCTGGCCAAGAAGCTCCTGACAAAAATCGATATTCCTCACCATGTCAGCAGCGTCTCCGACAGCAAGGGAGGGAAGTTTCCGCCGTGGGTGAGGGAAGATGATAGGAAGCTTCTGGAAGCGAATGGGGCAGCGGTGGATGCAGTGGTGGCTTCAGATGGGACGGGGAACTTCACGAAGATAATGGATGCGGTGATGGCGGCACCGGATTATAGCATGAAGAGGTTCGTGATATACGTCAAGAGAGGGGTTTATAATGAGTACGTTGAGATTAAGAAGAAGAAGTGGAATATTATGATGATTGGGGATGGTATCGGCGCCACCGTTATCACCGGTAACCGGAATGTTGTCGACGGCTGGACCACCTTCCGATCAGCAACCTTCGCTGTAAGTGGGAGAGGATTCATAGCAAGAGACATTACTTTCCAAAACACAGCAGGCCCTGAGAAGCACCAAGCAGTTGCACTAAGATCCGACTCAGACCTCTCAGTCTTCTACCGATGTGGGATCTTCGGCTACCAAGACAGTCTCTACACTCACACCATGCGCCAATTCTACAGAGAATGCACCATTACCGGCACCGTCGACTTCATCTTCGGCGACGCCACCGCAGTCTTTCAGAACTGTCGAATCCTCGCCAAGAAAGGCCTTCCAAACCAGAAGAACACAATCACAGCACAAGGCAGAAAGGACCCTAACCAACCAACAGGGTATTCAATCCAATTTTGTAACATAACCGCAGATTCAGACCTTATCGCTTCGATCAACACGACAGAGACATACTTGGGAAGGCCATGGAAGACATATTCAAGGACAATTGTAATGCAGAGTTACATAAGTGAGATGATAAGGCCACAAGGGTGGCTAGAGTGGAATGGTAACTTTGCACTGGACACATTGTACTATGCAGAGTACATGAACACAGGGGCAGGTGCTGGTGTGGCAAACAGAGTTACATGGCCAGGGTACCATGTTTTGAATAGTTCTAGCCAAGCTAGTAACTTCACTGTGGCTCAATTTATTGAAGGGAATCTTTGGTTGCCTGCAACTGGTGTAGCTTTCACTGCTGGATTAACTGTTTTGACCGGTAAATCTTAA 1584 0.4861 MALSSTKEPSRRHSIAFTFLFMLLLGHYTPLGSGSAPTDFVGSACLKVTPSEFISALREVLGVVQGVASILSKFSGRFGSFRLATAILDCIDLLDMSSDELNWSLSATQNPQGKHNSSGNLGSDLKTWLSAVLSNPDTCLEGLEGTNSVVKGLVSTGLGQVMSLAKKLLTKIDIPHHVSSVSDSKGGKFPPWVREDDRKLLEANGAAVDAVVASDGTGNFTKIMDAVMAAPDYSMKRFVIYVKRGVYNEYVEIKKKKWNIMMIGDGIGATVITGNRNVVDGWTTFRSATFAVSGRGFIARDITFQNTAGPEKHQAVALRSDSDLSVFYRCGIFGYQDSLYTHTMRQFYRECTITGTVDFIFGDATAVFQNCRILAKKGLPNQKNTITAQGRKDPNQPTGYSIQFCNITADSDLIASINTTETYLGRPWKTYSRTIVMQSYISEMIRPQGWLEWNGNFALDTLYYAEYMNTGAGAGVANRVTWPGYHVLNSSSQASNFTVAQFIEGNLWLPATGVAFTAGLTVLTGKS* 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g2777 527 SMART PMEI_2 36 168 IPR006501 GO:0004857
Aev01g2777 527 ProSitePatterns Pectinesterase signature 2. 353 362 IPR033131 -
Aev01g2777 527 CDD PMEI-like_4 14 170 - -
Aev01g2777 527 Gene3D Invertase/pectin methylesterase inhibitor family protein 46 172 IPR035513 -
Aev01g2777 527 Gene3D - 207 522 IPR012334 -
Aev01g2777 527 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 44-RELATED 48 520 - -
Aev01g2777 527 PANTHER PECTINESTERASE 48 520 - -
Aev01g2777 527 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 58 164 IPR035513 -
Aev01g2777 527 Pfam Pectinesterase 209 506 IPR000070 GO:0030599|GO:0042545
Aev01g2777 527 ProSitePatterns Pectinesterase signature 1. 234 253 IPR018040 -
Aev01g2777 527 Pfam Plant invertase/pectin methylesterase inhibitor 80 153 IPR006501 GO:0004857
Aev01g2777 527 SUPERFAMILY Pectin lyase-like 206 519 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g2777 Aev-Chr1 30306172 30309435 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g2777 11 520 Carbohydrate Esterase AT3G43270 62.380 0.0 697
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g2777 K01051 - gmx:100814987 767.303
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g2777 01 30306172 30309435 Aev04g1740 04 13349733 13355848 PCT