Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g2748 ATGGTGAATCCTAACATAGTCGACAAGGCCGAGGAGCAAAACGATTCGAGTCCAAAGTACAGAGGTGTCCGGAAGAGGAAGTGGGGCAAATGGGTGTCCGAAATAAGGCTTCCCAACAGCCGCCAGAGGATTTGGTTGGGTTCCTATGACTCCGCCGAGAAGGCGGCGCGTGCGTTCGACGCTGCCATGTTCTGCTTACGTGGCCGCAACGGCAGGTTCAATTTCCCCGACAATCCTCCCGACATCGCTGGCGGAAGGAACATGACGCCATCTCAGATTCAGGCCGCTGCTGCCCGATTCGCCAATCCGGATCCTCAAGAGGGTCTCTCGGGTCAACCCGAGTCCATGGAGTGTTCGATGGAAGGGACTGTGTCGCGTGTGGAGCCTGAGTCCCCATCAAATTCTGTGTCAGAGGTGACGGTCCAAATGGACAGTGACGTCACACTCAATGCCGGTCTGGTTCCCGATTTGTCTGCCCCGATTGGGTCGGGTAATTTTTACGCTAATTACGGGTATTTTCCGGGTTTCGATGATTTTGGAGCTGGATTCTACATGCCCGGTGTGCCTAATGTTGATTACGTAGAAGAAAACATGGATGGTTTAATAGTGGATGAATCGTTTCTGTGGAATTTCTAA 636 0.5267 MVNPNIVDKAEEQNDSSPKYRGVRKRKWGKWVSEIRLPNSRQRIWLGSYDSAEKAARAFDAAMFCLRGRNGRFNFPDNPPDIAGGRNMTPSQIQAAAARFANPDPQEGLSGQPESMECSMEGTVSRVEPESPSNSVSEVTVQMDSDVTLNAGLVPDLSAPIGSGNFYANYGYFPGFDDFGAGFYMPGVPNVDYVEENMDGLIVDESFLWNF* 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g2748 211 PRINTS Ethylene responsive element binding protein signature 20 31 IPR001471 GO:0003700|GO:0006355
Aev01g2748 211 PRINTS Ethylene responsive element binding protein signature 42 58 IPR001471 GO:0003700|GO:0006355
Aev01g2748 211 SUPERFAMILY DNA-binding domain 19 77 IPR016177 GO:0003677
Aev01g2748 211 SMART rav1_2 19 82 IPR001471 GO:0003700|GO:0006355
Aev01g2748 211 Pfam AP2 domain 18 68 IPR001471 GO:0003700|GO:0006355
Aev01g2748 211 MobiDBLite consensus disorder prediction 1 21 - -
Aev01g2748 211 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 4 211 - -
Aev01g2748 211 PANTHER TRANSCRIPTION FACTOR AP2-EREBP FAMILY-RELATED 4 211 - -
Aev01g2748 211 CDD AP2 18 78 IPR001471 GO:0003700|GO:0006355
Aev01g2748 211 Gene3D AP2/ERF domain 19 77 IPR036955 GO:0003700|GO:0006355
Aev01g2748 211 ProSiteProfiles AP2/ERF domain profile. 19 76 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g2748 Aev-Chr1 30092097 30092732 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g2748 19 211 AP2-EREBP Transcription Factor Family AT1G19210 50.505 9.53e-57 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Aev01g2748 AP2 6.8e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g2748 - - gmx:732656 271.166