Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g2722 ATGATGAATGGAAGGAACAGGTTCCCTTTCACTCCTTCCCAGTGGCAAGAGCTTGAACACCAGGCCCTCATCTACAAGTACATGGCTTCAGGTATCTCCATTCCACCTGATCTTCTCTTCTCCATCAAAAGAAGCTACATGGACTCTCCTCTTTCTTCAAGGCTCTTGCCTCACCAGGCCCAACACTTTGGGTGGAACTATTTGCAGATGGGGCTGGGAAGAAAGATAGACCCAGAACCAGGTAGGTGCAGAAGAACTGATGGGAAGAAATGGAGGTGCTCAAAAGAGGCATACCCAGATTCAAAATACTGTGAGAGGCACATGCACAGAGGGAAGAACCGTTCAAGAAAGCCTGTGGAAGTTTTGAAAACAACACCAACTGCTGCATCAAGCACAGATGCCCCTGCATCAACAACCACACCAACAATCTTGTCAATCACCAAAAATAGCCCTGCACTAACCCCAACCACTACTCACTCTCTCTCACCTCTCACTACTTCCCTCTCCTCTCATCATGACACTACACCCTTCCACAACCACCACCACCACCCTCCCTCTCCCTATGCTTCTTCCCATCTTCACCACCACTCCTTCCTCTTCCATCACCAACCTTCTTCAAGGTCCAATGCTCTGTCTTTTCAAGACAACAACAGTGCCCCCTTGTTCCTTGACACTGGTTCTTGCTCCCAGAATAACAGCACTGAGTGCAGGGACAGGTATGTTTATGGGCTGAAAGAGGAGGTTGATGAGCATGCTTTCTTCACCGAACCTTCTGGAACAATGAGGAGCTTCTCTGCTTCCTCCATGGATGATTCATGGCAACTCACACCACTTACTATAAGCTCCTCATCATCTTCGAAACAGAGGAGCTGCTCTGGTTTGTCCAATGAAAACGAGTACTCTTACTTGCAACTTCATCAGAGCCTCAGTGACAACTCAAAGCAACCAACAAGAGAGCAAGATCAGGGTTGTTTCATATCTGGAAGTGACATCAAATGCGAAACATTCATGAAACTTGGGAAAGAAGAGCCTCAGAAAACCGTTCATCGATTCTTTGATGAGTGGCCACCCAAGAGCAGAGGCTCATGGCTTGATTTGGATGACAAGTCATCCACAACTCAGCTTTCAATCTCCATTCCCGCATCTTCTCATGAGTTCACAGCTTTCAGTTCAAGAAACCAACGAGATGGGTGA 1194 0.4732 MMNGRNRFPFTPSQWQELEHQALIYKYMASGISIPPDLLFSIKRSYMDSPLSSRLLPHQAQHFGWNYLQMGLGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVEVLKTTPTAASSTDAPASTTTPTILSITKNSPALTPTTTHSLSPLTTSLSSHHDTTPFHNHHHHPPSPYASSHLHHHSFLFHHQPSSRSNALSFQDNNSAPLFLDTGSCSQNNSTECRDRYVYGLKEEVDEHAFFTEPSGTMRSFSASSMDDSWQLTPLTISSSSSSKQRSCSGLSNENEYSYLQLHQSLSDNSKQPTREQDQGCFISGSDIKCETFMKLGKEEPQKTVHRFFDEWPPKSRGSWLDLDDKSSTTQLSISIPASSHEFTAFSSRNQRDG* 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g2722 397 MobiDBLite consensus disorder prediction 124 173 - -
Aev01g2722 397 ProSiteProfiles QLQ domain profile. 9 44 IPR014978 GO:0005524|GO:0005634|GO:0006355
Aev01g2722 397 ProSiteProfiles WRC domain profile. 77 121 IPR014977 -
Aev01g2722 397 SMART QLQ_2 8 44 IPR014978 GO:0005524|GO:0005634|GO:0006355
Aev01g2722 397 PANTHER GROWTH-REGULATING FACTOR 5 4 373 - -
Aev01g2722 397 Pfam QLQ 9 42 IPR014978 GO:0005524|GO:0005634|GO:0006355
Aev01g2722 397 MobiDBLite consensus disorder prediction 108 190 - -
Aev01g2722 397 Pfam WRC 78 120 IPR014977 -
Aev01g2722 397 PANTHER - 4 373 IPR031137 GO:0005634|GO:0006351|GO:0032502
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g2722 Aev-Chr1 29944243 29945832 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g2722 7 120 GRF Transcription Factor Family AT3G13960 72.807 1.93e-56 188
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Aev01g2722 WRC 8.6e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g2722 - - gmx:100783524 553.518
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g2722 01 29944243 29945832 Aev01g2722 01 29944243 29945832 ECH
Aev01g2722 01 29944243 29945832 Aev04g1437 04 10143065 10146377 PCT