Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g2713 ATGCCGGTGAATCTGACGGCGAACGCGATCCCGGCGATCGTGGCCGGCGAGATGAACTCGAAGCCGCTGGTGCAGGTGCTGGATATCAAGTTAATTTCGAACAGCAAGCAGCAGGAGAGGTATCGTCTTTTGCTCTCCGATGCGGTTTCCTCTCAGCACGCTATGCTCGCTACTCAGCTCAACGACCGAGTCCGAACCGGACGAGTTAAGAAAGGTTCCGTCGTTCAGCTAATCGAGTACATTTGCAGTCCTATTCAGAACCGCAAGATTGTTGTGGTGCTGAACATGGAAACTATAATACCAGATTGTGAGATCATTGGAAATCCAACGTCATTTGTGGAATCTGATATACCATCCCAGGGAGCGTTGCCTAGTAACAATATGCAGAACTTATCCAAGAGTAATAATTATCATCCGCCAGCTCAAAATGCAACTTCTTATGTGCAGAATTTCCGGCCAACTGTTCAACCTGCATACCAACCACCGCCACCAGTTTACAAAAGCCATGGTGCAATTCTGAAGAACGAGGCCCCTGCTAGAATTATTCCTATAGCTTCATTGAATCCTTATCAAGGCCGCTGGGCCATCAAGGCTAGGGTAACTGCAAAAGGAGATCTGCGGCGCTACAATAATGCTCGGGGAGATGGGAAAGTCTTCTCCTTTGATCTCCTTGACTCTGATGGAGGTGAGATACGAGTAACCTGCTTTAATGCTGTCGTTGATCGCTTCTACGATGCAGTCGAGGTTGGCAGCGTTTACTTGATATCCAAAGGTACCCTGAAACCTGCACAGAAGAATTTCAACCATTTGAAGAATGAATGGGAAATTCTTTTGGATTTGGCTTCAACTGTTGAGCTTTGCCCAGACGAAGATGGTTCTATACCTAAACAGCAATTCTCATTTAGGCCTATCAGTGATATTGAGACTGTTGACAGTAATTCTATTCTTGATGTTATTGGGGTTGTGACATCTGTGAATCCATCAGTTCCCATCTTGAGGAAGAATGGAATGGAAACCCAGAGAAGGATTTTGAATCTAAAGGACGCTTCTGGCAGGAGTGTTGAGTTAACCCTTTGGGGGGAATTTTGCAACAGAGAAGGGCAAAAGTTGCAAGAGATGATCGATGCTGGGATGTTCCCTGTTCTGGCAGTCAAAGCTGGTAAGGTCAATGACTTTAGTGGGAAATCTGTAGGGACTATTTCTGCCACTCAGCTTTTCATAAATCCCGATTTCCCCGAGGCACAGAGCTTAAGAGACTGGTTTGATCGAGTGGGAAAAGATTCTGCTTCTCTGTCCATTTCTAAGGACATTTTACCTGGAGGACCTAAGAATGATGTACGCAAGACTGTGTCTCAGATCAAGAATGAAGGTTTAGGGCGGTCAGATAAGCCAGATTGGATAACAGTGAGGGCAACCATATCGTTCATCAAGACAGATACCTTTTGTTACACTGCTTGCCCTCTGATGATCGGAGATCGTCAGTGCAATAAGAAAGTGACCAGGTCAGGAAACACAAAGTGGCAATGTGATAGGTGCAACCAAGAGTTTGAGGAGTGCGATTATCGATATCTTCTTCAAGCTCAGATTCTCGATCACACTGGAATAACTTGGGTAACTGCTTTCCAGGAAACAGGGGAAGAGATTCTGGGTTACTCCGCTAAGGAGCTGTACTTATTGAATCATGAACAAGAGGATAATGAGAAGTTCGGGGGAATAATCAAGAGTAGATTGTTCAACCAGTTTCTCTTGAGGCTGAAAATTAAGGAGGAACTGTATGGTGATGAGCAGAGGGTGAAGATTACAGTAGTTAAGGCAGATAAGGTGGATTATTCTTCGGAGAGTAAGCACATGCTTGATTTGATTTCAAAACCCTCTAGGCACTAA 1884 0.4501 MPVNLTANAIPAIVAGEMNSKPLVQVLDIKLISNSKQQERYRLLLSDAVSSQHAMLATQLNDRVRTGRVKKGSVVQLIEYICSPIQNRKIVVVLNMETIIPDCEIIGNPTSFVESDIPSQGALPSNNMQNLSKSNNYHPPAQNATSYVQNFRPTVQPAYQPPPPVYKSHGAILKNEAPARIIPIASLNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVDRFYDAVEVGSVYLISKGTLKPAQKNFNHLKNEWEILLDLASTVELCPDEDGSIPKQQFSFRPISDIETVDSNSILDVIGVVTSVNPSVPILRKNGMETQRRILNLKDASGRSVELTLWGEFCNREGQKLQEMIDAGMFPVLAVKAGKVNDFSGKSVGTISATQLFINPDFPEAQSLRDWFDRVGKDSASLSISKDILPGGPKNDVRKTVSQIKNEGLGRSDKPDWITVRATISFIKTDTFCYTACPLMIGDRQCNKKVTRSGNTKWQCDRCNQEFEECDYRYLLQAQILDHTGITWVTAFQETGEEILGYSAKELYLLNHEQEDNEKFGGIIKSRLFNQFLLRLKIKEELYGDEQRVKITVVKADKVDYSSESKHMLDLISKPSRH* 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g2713 627 Pfam Replication protein A OB domain 304 408 IPR031657 -
Aev01g2713 627 SUPERFAMILY Nucleic acid-binding proteins 1 108 IPR012340 -
Aev01g2713 627 Gene3D - 4 113 IPR012340 -
Aev01g2713 627 CDD RPA1_DBD_B 315 422 - -
Aev01g2713 627 Gene3D - 293 431 IPR012340 -
Aev01g2713 627 SUPERFAMILY Nucleic acid-binding proteins 180 293 IPR012340 -
Aev01g2713 627 CDD RPA1N 9 100 IPR007199 GO:0003677|GO:0005634|GO:0006260
Aev01g2713 627 Pfam OB-fold nucleic acid binding domain 195 271 IPR004365 GO:0003676
Aev01g2713 627 PANTHER REPLICATION PROTEIN A 70 KDA DNA-BINDING SUBUNIT A 2 620 - -
Aev01g2713 627 Gene3D - 435 623 IPR012340 -
Aev01g2713 627 SUPERFAMILY Nucleic acid-binding proteins 447 623 IPR012340 -
Aev01g2713 627 Gene3D - 180 290 IPR012340 -
Aev01g2713 627 Pfam Replication factor-A protein 1, N-terminal domain 5 99 IPR007199 GO:0003677|GO:0005634|GO:0006260
Aev01g2713 627 TIGRFAM rpa1: replication factor-a protein 1 (rpa1) 5 623 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Aev01g2713 627 Pfam Replication factor-A C terminal domain 466 617 IPR013955 -
Aev01g2713 627 SUPERFAMILY Nucleic acid-binding proteins 298 425 IPR012340 -
Aev01g2713 627 PANTHER REPLICATION FACTOR A 1, RFA1 2 620 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Aev01g2713 627 CDD RPA1_DBD_A 183 286 - -
Aev01g2713 627 CDD RPA1_DBD_C 450 623 IPR013955 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g2713 Aev-Chr1 29888958 29891500 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g2713 26 623 Core DNA Replication Machinery Family AT2G06510 70.942 0.0 909
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g2713 K07466 - zju:107409151 1010.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g2713 01 29888958 29891500 Aev01g2713 01 29888958 29891500 ECH