Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g2711 ATGGGTGATGTTCTAAGCCCCATCACAGTGTCACCCCCTCCTTCTCCTTCTTCCCCAAGCAAGTCCAACATTCTCATGCTATATTATGGCCTAATAGTGGTTGGAACTGCAGCCATAGCATTAGCACTATACAACTACATAGTCATCAAAAGGTGTAGCAGGCGCCACATGCATCAACCCCACCCTCCTCCAAGGCCAAATGGGTTGGTCCAAGTGGTAGTGGAAAACAGCATGAGCTATGACAATAATTCTCAGAGGAACCTTCTCTCAAGCTTCAAGTACAAGAAAGAACAGAGCAAAAAAGGTGGTGGTGGAGGAAAAGATCATCATAATGAAGAAGATGGTGATGATTATTATTATGAGTGCCCTGTTTGTTTATCGGTTTTTGAAGAAGGGGAAGAGGTTAGGAAGCTACCAAGGTGCAAGCACTCTTTCCATGTTCAATGCATAGACATGTGGCTTTACTCTCACTTTGATTGCCCAGTTTGTAGGACACCGGTTGGGCCTTTCTGCCGCCGTGTTCCGCCGGAGAATTCTGCCGAGGGGTTGCCGGAATCCGGTGGTGGTGTAACAGTTTGA 579 0.468 MGDVLSPITVSPPPSPSSPSKSNILMLYYGLIVVGTAAIALALYNYIVIKRCSRRHMHQPHPPPRPNGLVQVVVENSMSYDNNSQRNLLSSFKYKKEQSKKGGGGGKDHHNEEDGDDYYYECPVCLSVFEEGEEVRKLPRCKHSFHVQCIDMWLYSHFDCPVCRTPVGPFCRRVPPENSAEGLPESGGGVTV* 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g2711 192 CDD RING-H2_EL5_like 121 164 - -
Aev01g2711 192 PANTHER RING-H2 FINGER PROTEIN ATL52-LIKE 11 174 - -
Aev01g2711 192 MobiDBLite consensus disorder prediction 1 20 - -
Aev01g2711 192 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 86 173 IPR013083 -
Aev01g2711 192 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 11 174 IPR044675 -
Aev01g2711 192 SMART ring_2 122 163 IPR001841 -
Aev01g2711 192 SUPERFAMILY RING/U-box 121 172 - -
Aev01g2711 192 Pfam Ring finger domain 121 164 IPR001841 -
Aev01g2711 192 ProSiteProfiles Zinc finger RING-type profile. 122 164 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g2711 Aev-Chr1 29885933 29886511 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g2711 9 181 C3H Transcription Factor Family AT2G17450 31.285 6.11e-19 78.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g2711 - - aprc:113852327 197.978
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g2711 01 29885933 29886511 Aev01g2711 01 29885933 29886511 ECH
Aev01g2711 01 29885933 29886511 Aev04g1424 04 9999398 10000077 PCT