Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g2708 ATGGAGGATGAGGCTCTGAGCAGGAGGAGCTTGGGCTTAGAGCCTTCGATGGGACCTAACGCGGTGGCGGAGAAAAGGATGCGCCGCCGAGGCGTGGTGGTAGCGACAGCAACCGCGCTGCCTCCAGTTGACACTTCACAGCCGGTAACAGAATCTCTGGTTCCATTGCATGTTAAAGTAGGAGCGCATGGCGCCTACCCACAGCGGAATCTCGGTTTTCGCGCTTTTATAAGCGAAGCAGCTCAACCAAACATCACTACACCACTCACAGCACGTCCCAAGAAACCGGGCAACGACTCACTTAGTAAGCCCGACGATTCCGATCCCAACAATGCATCTAAAAACCAATCCATCAAATCCCTGACTTCTCAGATAAAGGACATGGCGCTGAAGGCGTCAGGGGCGTACAAGCATTGCGCTCCCTGCACGGGGCCGGCGATGCAGGGGAGAATGAGGAGCACCGCGGAGCCGTCGGAGACAGAATCGGAGCGGTTCCGATGGTCGTACAAGAGAACGGGGAGCTCGAGCTCAGCGACGACAAGAGGTTGGGGAAAAGAGATGGAAGCGAGGCTGAAGGGGATTTCATCGTCGAGCGGGGAGGGTACACCAAACTCCGCCAGCGGACGCCGTGGGGAACCGGTGGTTCTGTTCGTGGAGGAGAACGAACCGAAAGAGTGGGTGGCGAACGTGGAGCCCGGTGTATTGATCACGTTCGTGTCTCTTCCACGTGGCGGCAACGATCTCAAGCGCATACGGTTCAGTCGAGAGATGTTTAACAAATGGCAAGCTCAGAGGTGGTGGGCAGATAACTATGACAAGGTCATGGAACTTTACAATGTTCAAAGGCTTAGCCGCCAAGCATTCCCTCTTCCAACGCCACCAAGGTCTGAAGATGAGAGTTCAAAGCTTGAATCAGCAGAAGAGAGCCCGGTAACGCCACCACTAACCAAGGAACGGTTACCTCGTAATTTGCACCGTCCAACAGGAATGGGAATGGGATACTCCTCCTCAGACTCCTTCGACCATCAGTCCATGCAATCCCGGCAATTCTATGATGCAAATGGTATGAACTCTACTCCAAAAGTGTCCACCATTAGCGCGGCGAAGACGGAGATATCATCTATGGATGCTTCCATCAGGAGTAGCTCCTCCAGAGATGCTGATCGCTCCTGTGATCTGTCCATCAGCAATGCAAGTGATTTGGACACAGAGTGGGTTGAGCAGGATGAACCTGGTGTTTACATTACCATCAGAGCATTGCCCGGTGGCAAGAGAGAGCTCAGAAGAGTCAGATTCAGCCGGGAAAAATTCGGGGAGATGCATGCTAGATTATGGTGGGAGGAGAATCGTGCCAGAATTCATGAACAGTACTTGTGA 1377 0.5345 MEDEALSRRSLGLEPSMGPNAVAEKRMRRRGVVVATATALPPVDTSQPVTESLVPLHVKVGAHGAYPQRNLGFRAFISEAAQPNITTPLTARPKKPGNDSLSKPDDSDPNNASKNQSIKSLTSQIKDMALKASGAYKHCAPCTGPAMQGRMRSTAEPSETESERFRWSYKRTGSSSSATTRGWGKEMEARLKGISSSSGEGTPNSASGRRGEPVVLFVEENEPKEWVANVEPGVLITFVSLPRGGNDLKRIRFSREMFNKWQAQRWWADNYDKVMELYNVQRLSRQAFPLPTPPRSEDESSKLESAEESPVTPPLTKERLPRNLHRPTGMGMGYSSSDSFDHQSMQSRQFYDANGMNSTPKVSTISAAKTEISSMDASIRSSSSRDADRSCDLSISNASDLDTEWVEQDEPGVYITIRALPGGKRELRRVRFSREKFGEMHARLWWEENRARIHEQYL* 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g2708 458 MobiDBLite consensus disorder prediction 103 117 - -
Aev01g2708 458 MobiDBLite consensus disorder prediction 287 341 - -
Aev01g2708 458 ProSiteProfiles BRX domain profile. 403 458 IPR013591 -
Aev01g2708 458 MobiDBLite consensus disorder prediction 146 184 - -
Aev01g2708 458 MobiDBLite consensus disorder prediction 1 25 - -
Aev01g2708 458 ProSiteProfiles BRX domain profile. 224 279 IPR013591 -
Aev01g2708 458 MobiDBLite consensus disorder prediction 84 117 - -
Aev01g2708 458 Pfam Transcription factor BRX N-terminal domain 111 142 IPR027988 -
Aev01g2708 458 PANTHER PROTEIN BREVIS RADIX-LIKE 4 91 458 - -
Aev01g2708 458 Pfam Transcription factor regulating root and shoot growth via Pin3 403 457 IPR013591 -
Aev01g2708 458 Pfam Transcription factor regulating root and shoot growth via Pin3 224 278 IPR013591 -
Aev01g2708 458 PANTHER PROTEIN BREVIS RADIX-LIKE 1 91 458 IPR044532 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g2708 Aev-Chr1 29868707 29874943 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g2708 116 458 Major Intrinsic Protein MIP AT1G31880 46.459 7.31e-86 265
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g2708 - - gmx:100794109 620.542
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g2708 01 29868707 29874943 Aev01g2708 01 29868707 29874943 ECH
Aev01g2708 01 29868707 29874943 Aev04g1422 04 9984987 9992506 PCT