Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g2706 ATGAAGCCGTTCCTCTTGTTGAATCATCCTGATACTGAGATCAATTGTGCACAAGTTGATTGTAATCACTCGATGGCTCATGCTCCTTATCCTTATGGCGATCCTTTTTTCAGTGGCTCATTCGTCACATATGGACCACAGGCTGTTACTCAACCACAAGTGTTGCCCCAAATGCTTGGATCAGCATCCCCAAGAATTGCATTACCTCTTGATCTTGCTGAAGATGGGCCCATTTATGTCAATGCAAAACAATACCATGGTATACTGAGAAGGCGACAATCACGAGCAAAGCTTGAGGCTCAAAACAAGCTTATCAAAAGTCGCAAGCCGTATCTTCACGAGTCCCGGCATCGTCATGCTTTGAATAGGGTTAGGGGATCAGGGGGACGCTTTCTCAGTGCTAAACAGCTGCAGCAGTCTAATGCAGAACTCATCAATGGCTCCCATTCAGCCTCTAATCCTATGAATGCATATCAAAAGAAAGATACATCAGAGGTGGAAAGTCATCCCTCAAGGACCGGAGAAAACGCGTCTTATTCCATCACAACCAGCTCTGATCTAACAAGTTTGTCCTGCAACAGTGTCAAATACAGGCACCCTGAACACAAGTTCTTGGGGAATTCCCCAAACATCGGTGGAGCATCGCAATGCGGTGGGGGATTCACTTTCGCTGGTTGA 678 0.4617 MKPFLLLNHPDTEINCAQVDCNHSMAHAPYPYGDPFFSGSFVTYGPQAVTQPQVLPQMLGSASPRIALPLDLAEDGPIYVNAKQYHGILRRRQSRAKLEAQNKLIKSRKPYLHESRHRHALNRVRGSGGRFLSAKQLQQSNAELINGSHSASNPMNAYQKKDTSEVESHPSRTGENASYSITTSSDLTSLSCNSVKYRHPEHKFLGNSPNIGGASQCGGGFTFAG* 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g2706 225 Gene3D - 74 136 - -
Aev01g2706 225 PRINTS CCAAT-binding transcription factor subunit B signature 108 131 IPR001289 GO:0003700|GO:0006355
Aev01g2706 225 PRINTS CCAAT-binding transcription factor subunit B signature 77 99 IPR001289 GO:0003700|GO:0006355
Aev01g2706 225 PANTHER TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED 1 220 IPR001289 GO:0003700|GO:0006355
Aev01g2706 225 ProSitePatterns NF-YA/HAP2 subunit signature. 79 99 IPR018362 GO:0003677|GO:0016602
Aev01g2706 225 MobiDBLite consensus disorder prediction 146 161 - -
Aev01g2706 225 Pfam CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B 77 131 IPR001289 GO:0003700|GO:0006355
Aev01g2706 225 ProSiteProfiles NF-YA/HAP2 family profile. 74 134 IPR001289 GO:0003700|GO:0006355
Aev01g2706 225 MobiDBLite consensus disorder prediction 146 180 - -
Aev01g2706 225 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR 1 220 - -
Aev01g2706 225 SMART cbf3 73 134 IPR001289 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g2706 Aev-Chr1 29852386 29853758 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g2706 16 140 CCAAT-HAP2 Transcription Factor Family AT1G17590 56.349 1.10e-38 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YA Aev01g2706 CBFB_NFYA 3e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g2706 K08064 - gmx:100792905 339.347
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g2706 01 29852386 29853758 Aev01g2706 01 29852386 29853758 ECH