LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aev01g2692	ATGTCCACCTTCGCCGTCGCCGGCGGCGGCGAAATGAGATCGGTTGCTGTCGCCATCAGCAGCGGCTCCGGCTCCGGAAGGGGAAGCCGGCGAGCTGTTCAGTGGACGGTGAAGCATCTCGTCCCTCAAGCTGATAGGTTCATATTAGTACACGTCATCCCCAAAATCACTTCAATTACAACCCCATCTGGAGACTGTGTTCCTATTTCGGAAGCAGATGAAGATTTGTTTGCAGCTTATGTGGACGATGCGAAGCAGAAGTCTGAACAAATCTTTGTTCCGTTCAAGAAACTATGCGACCCAGATACAGACACAATGGAAACTGTGTTGCTGGAAGATGATAATCCTGCAAATGCAATTCTTAGCTTTATTTCTGAGTCTGGCATCCAAACATTAGTGATGGGTTCTGACTCCTCAAATTTCATTACAAGGAAATTGAAAGGACCAGGGATATCAGAAACAGTTCTAAAATGTGCTCCTGAGTGCTGTGATGTATATCTTGTAGCTAGAGATAGAATTATGTCCAAGTTAGGTGATTCTTCATCTTCTATTTCTCAAGAAACTAGCTCAAGGTACTTCATGTCTACACAAGTAAATGAAGCAGGCAATGGTGATGGAGTTGGTAGAGAAATGGATGGAAGTAACTCTTCCTCAACAGACCATAGAATTCTAAAAAATTTCAGATTTTTATCGATATCAGAACGTAGTTACATCGGTCTACAAACATTCAGTCGTCGGAATTCTTTCGAAAGTTCTACCATTAGAGATGATTTTGAAACAATTAGCCTCCGCTCTTTTGACTCCATATCTTCTGCACAACGTGAACAGTTAGCCATGCAAGAAGAAGTGGAACGGCTGCAGCAGGAGTTGCAGAATACTAATGCCATGTACAAACAGGTTTGCGAAGAACTGGCTGGTATTCAGAGCAAGGCCTTTTCACTTTCTTCTGAGTCTATTGAAGAAGCTAAAATAGTTGATGCTTCCCTAAAGAGAGAGGAGATTTTGAGACAGATTGCTGCTGAAGAGAAAGAGAAATATTTAAAAGTCATGGAGGAACTCGAGGAGGCGAGAAAGGTGCTTGCCAATGAGTCGTATGAAAGACAGATGGCTGAACTTAATGTCCTTAGAGAATCCATAGAAAAAAGGAGAATTGTTGATACATTGCTCACAGGTGACAGGAGATACAGAAAGTACACTATGGATGAAATCAAGACAGCAACAAAATCCTTCTCTGAGGACTTGATGATTGGTGAAGGAGGGTACGGGAAAGTTTACAAGTGTATTCTTGATCACACACCAGTAGCTGTAAAGGTTCTGCATCCAGATGCAATGAACAAGAAAGAGGAGTTTCTGAAAGAGGTTGAGATTCTTAGTCAACTACACCATCCAAATATGGTTTTGTTACTTGGAGCCTGTCCTGAGACTGGTTGCCTTGTTTATGAATACCTGGAAAATGGAAGTCTAGAAGACTACATTTTCGACCAAAAAAATCGAAAGCAGCCACTTCCTTGGTTTATTCGATTCCGCATAGTTTTTGAGATGGCCTGCGGGCTCTCATTCTTGCACAATGCACAGCCAGAGCCTATTGTTCATCGTGATATCAAACCTGGCAATATCTTGTTAGACGGAAATTACGTGAGCAAAATTGCCGATGTTGGGCTGGCTAAACTCCTTTTGGATGTTGTGCCAGACAATGTCACAGAGTACAGAGAATCTGTACTTGCTGGCACACTGCATTACATGGATCCAGAGTATCAGAGAACCGGCACTGTCCGACCGAAATCAGATGTATATGCTTTTGGAGTTATAACTCTCCAACTGATAACTGGCCGCCGCGCACGTGGACTCATTGTGGCCTTTGAAGATGCAGTTAAAAAGGGCTCAGTCCGCGATATTGCAGATAAATCAGCTGGTGATTGGCCACCAAATGAAACAATGGAATTGGCCCAAATTGCCCTCAAATGTGTTGCACTAAGATGCAGAGATAGACCAGAACTTGATACTGAAGTTCTTCCACTGCTCGAACGACTCTTAGAAGTAGCAGATGCAAGTGCAAACACAGGAAGAAGAAATATAATAGTCACGCCAAGCCAGTACTATTGTCCAATTCTTCAGGAAGTAATGAATGATCCATATATTGCTGCGGATGGATTTAGTTATGAGTACAGAGCAATCAAGGCATGGCTCAGCAGACACAATGTGTCACCAGTGACAAGGCATAGACTCAAGCATTCTCTGTTGATTCCAAACCACACTTTACGTTCTGCTATTCAGGAATGGAAATCAGGAGTCTCCTCATTTGATTAG	2307	0.4287	MSTFAVAGGGEMRSVAVAISSGSGSGRGSRRAVQWTVKHLVPQADRFILVHVIPKITSITTPSGDCVPISEADEDLFAAYVDDAKQKSEQIFVPFKKLCDPDTDTMETVLLEDDNPANAILSFISESGIQTLVMGSDSSNFITRKLKGPGISETVLKCAPECCDVYLVARDRIMSKLGDSSSSISQETSSRYFMSTQVNEAGNGDGVGREMDGSNSSSTDHRILKNFRFLSISERSYIGLQTFSRRNSFESSTIRDDFETISLRSFDSISSAQREQLAMQEEVERLQQELQNTNAMYKQVCEELAGIQSKAFSLSSESIEEAKIVDASLKREEILRQIAAEEKEKYLKVMEELEEARKVLANESYERQMAELNVLRESIEKRRIVDTLLTGDRRYRKYTMDEIKTATKSFSEDLMIGEGGYGKVYKCILDHTPVAVKVLHPDAMNKKEEFLKEVEILSQLHHPNMVLLLGACPETGCLVYEYLENGSLEDYIFDQKNRKQPLPWFIRFRIVFEMACGLSFLHNAQPEPIVHRDIKPGNILLDGNYVSKIADVGLAKLLLDVVPDNVTEYRESVLAGTLHYMDPEYQRTGTVRPKSDVYAFGVITLQLITGRRARGLIVAFEDAVKKGSVRDIADKSAGDWPPNETMELAQIALKCVALRCRDRPELDTEVLPLLERLLEVADASANTGRRNIIVTPSQYYCPILQEVMNDPYIAADGFSYEYRAIKAWLSRHNVSPVTRHRLKHSLLIPNHTLRSAIQEWKSGVSSFD*	769

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Annotation information

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Aev01g2692	768	Gene3D	Transferase(Phosphotransferase) domain 1	483	694	-	-
Aev01g2692	768	PANTHER	U-BOX DOMAIN-CONTAINING PROTEIN 34	14	763	-	-
Aev01g2692	768	Pfam	U-box domain	696	761	IPR003613	GO:0004842\|GO:0016567
Aev01g2692	768	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	529	541	IPR008271	GO:0004672\|GO:0006468
Aev01g2692	768	Gene3D	Phosphorylase Kinase; domain 1	390	482	-	-
Aev01g2692	768	SMART	serkin_6	410	674	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
Aev01g2692	768	Coils	Coil	269	303	-	-
Aev01g2692	768	Pfam	Universal stress protein family	28	160	IPR006016	-
Aev01g2692	768	Gene3D	HUPs	12	170	IPR014729	-
Aev01g2692	768	CDD	RING-Ubox_WDSUB1_like	699	739	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Aev01g2692	Aev-Chr1	29774338	29778020	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Aev01g2692	6	762	Plant U-box Gene Family	AT5G57035	51.480	0.0	785

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Transcription factors information

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Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_RLCK-IXb	Aev01g2692		PK_Tyr_Ser-Thr	5e-42	CL0016

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aev01g2692	-		-	vun:114178082	1126.69

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Event-related genes

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Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Aev01g2692	01	29774338	29778020	Aev01g2692	01	29774338	29778020	ECH

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